| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0904 |
|---|
| Symbol | |
|---|
| ID | 4282071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1023538 |
|---|
| End bp | 1024497 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638137770 |
|---|
| Product | riboflavin biosynthesis protein RibF |
|---|
| Protein accession | YP_753591 |
|---|
| Protein GI | 114566437 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0196] FAD synthase |
|---|
| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTAG TAAGAGAAAT AGATAATTTT ACTAATAGTG AAGGCTCGTT ATTTTTAGCC
CTGGGTAATT TTGATGGAGT ACACCGGGGG CACCAGCGTT TGATTGGTGA TTTAGTAAAG
AAAGCCCGGG CCAACAATGG AATCGCGGCG GCATTTATTT TTGAACCCCA CCCGGCTATG
GTGCTTAACC CCAGTCGGGC TCCCAAACTT TTGGTAACTG CGGAACGAAA AGCCGAGTTA
ATGAATAAAC TGGGTTTGGA TAAACTGATC TACAATACCT TTGACCTGGC CATATCCCAG
TGCTCTCCGG AAGAGTTCGT AAAAAGCATC CTGGTCGAGA GATTAAAAAT TAGAGAAGCG
TTTGTGGGAT TCAACTATTC CTTTGGTCAC AAAGGAAGTG GTACGCCTCA ACTATTAAAA
GAGCTGGGGA AAAAATATGA TTTCCAGGTT AATATCATTC CCCCGGTGGA AATCAAGGGG
CAGGTGGTAT CCAGCACTAT CATCCGCCAA GCCCTGGATG CCGGCGATAT GGAATTGGCC
CGGGAAATGC TGGGTTACTA TCCCATGATA GAAGGAAAGG TAATTGAAGG GGAAAAACGA
GGAGCAACTA TTGGTTTCCC TACAGCCAAC CTGGGGATTG GGGCAGAATT AAATATACCG
GTGAAAGGGG TATATGCGGC TCTGGCAGTG CTGGAAGGCG AAAATTTCGG GGCCGCCGTC
AACATAGGCA GCAAGCCCAC CTTTCATCAG GAATATCCAG TTTCGGTTGA GGCTCATTTA
ATCGATTTTA ACCGACAGGT TTATGATCAG GATTTAAGGC TGTTTTTCCT CCAAAAAATC
AGGGACGAAA AAAGATTTAG CAGCGTTGAC GAACTAATTA AGCAGATTGG GCTTGACCGA
AAGCAAGCTG GGGAAATATA TGAGTCTCTG GAAAGCAGAG GAAAGATAGA TATAATATGA
|
|---|
| Protein sequence | MEVVREIDNF TNSEGSLFLA LGNFDGVHRG HQRLIGDLVK KARANNGIAA AFIFEPHPAM
VLNPSRAPKL LVTAERKAEL MNKLGLDKLI YNTFDLAISQ CSPEEFVKSI LVERLKIREA
FVGFNYSFGH KGSGTPQLLK ELGKKYDFQV NIIPPVEIKG QVVSSTIIRQ ALDAGDMELA
REMLGYYPMI EGKVIEGEKR GATIGFPTAN LGIGAELNIP VKGVYAALAV LEGENFGAAV
NIGSKPTFHQ EYPVSVEAHL IDFNRQVYDQ DLRLFFLQKI RDEKRFSSVD ELIKQIGLDR
KQAGEIYESL ESRGKIDII
|
|---|
| |