Gene Swol_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0892 
Symbol 
ID4282059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1009421 
End bp1011133 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content47% 
IMG OID638137760 
Productprolyl-tRNA synthetase 
Protein accessionYP_753581 
Protein GI114566427 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0442] Prolyl-tRNA synthetase 
TIGRFAM ID[TIGR00409] prolyl-tRNA synthetase, family II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000147274 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGCTT CAGAATTATT CTTTCCCACT TTGCGGGAGG TACCCAGCGA GGCTGAAGTC 
TTGAGTCACC AGTTGCTGTT GAGAGCCGGC TTTATAAGAA AGGCTACTGC AGGTGTTTAT
AGCTATCTGC CTTTGGCCAA CCGGGTTCTC AAAAAAATAA TGAATATTGT CCGGGAAGAA
ATGGACCGGG CCGGGGGCCA AGAAGTAATT TTGCCTATAA TCCAACCGGC GGAACTGTGG
AAGAAATCAG GCCGTTGGGA GGTTTATGGC GATGAGATGT TTCGGCTAAA AGACCGGCAC
AATCGCGATT TTGCTCTGGG ACCGACGCAC GAAGAAATAA TTACCACTCT GGTGGATGCT
GATGTTCATT CCTACCGTCA CCTGCCTTTG CTGCTTTATC AGATACAGAA CAAATACCGG
GATGAAATTA GGCCCCGTTT TGGCTTGATG CGCGGGCGGG AATTTATCAT GAAAGACCTC
TACTCCTTTG ATATTGATGA GGAAGGATTG GATATTTCCT ATCACAAAAT GTACGAGGCC
TATAATCGTA TATTCCAGAG ATTAAAGCTG CAATACCGGG TGGTGGAGGC TGACAGCGGG
GCTATAGGCG GGAATGAAAG CCATGAATTC ATGGTTTTGG CGGAAAACGG CGAAGCCGAG
ATAGTATACT GCAAAAACTG CGATTATGGA GCTAATACGG AAAAGGCGGT TTGTTCCCTA
GAGGAACCAA AGGTTACAGA AGAAGAGCAG TTGGAACTAG AAAAGGTCCA TACCCCGGGA
CAGAGAACCA TACAGGACCT GGTTGACTAT ATGAATATTC CCAAAGAAAA GCAAATAAAG
ACCTTGATTT ATTATGCGGA TGAAGAGCTG GTGGCAGCAA TAGTACGAGG GGACCGTGAG
CTAAACGAAA TCAAATTTAA GAATGTGCTG GGTTGCAATC AATTGTTTAT GGCGGATGAG
ACCGCGGTTA AACAGCTTTG CAGCGCCGGT TTCGGTTCAC TGGGTCCGGT GGGACTGCCT
TTGAAAACTT ATATCGACCT GGAAGTCAGT CAGATGAAGA ATTTTGCCTG TGGGGCCAAT
GAAGATGACT ATCATTTCAT AAATGTAAAT CTGGGAAGAG ATTTTACGCC GGCCGGCATC
AACGATATTC GCAATGCTGT TGCGGGCGAT AGCTGTCCGG TTTGTTCAGC TCCTTTATAC
AGCATGCGGG GGATTGAGGT AGGACACATT TTTAAGCTGG GCACCAAGTA TTCTGAGGTT
CTGGAGGCCA ATTATCTGGA TCAGAAGGGA CAGGAGAAGC CTATGGTTAT GGGTTGTTAT
GGAATCGGCA TATCGCGTAC TATGGCTGCA GCCGTCGAAC AGAGTGCTGA TGAAAATGGT
ATTGTCTGGC CGCTTCCCAT TACCCCCTTT GAAGTTATTA TTGTTCCGGT CAACAGCAAA
AATGAGGAAC AGATGCAGGC GGCCTGGTCA CTTTATGAAG AGTTTAAACA AGAGGGATTG
GAGACTATTG TTGACGACCG GGATGAAAGG GCGGGTGTAA AGTTCAAGGA TGCCGATCTC
ATTGGGATAC CGCTGAGGAT TACTATTGGC CCTCGCTCTT TGCAGGAAAA GCAGGTAGAA
GTTAAGAAAA GAAGCGATAA GGATATAGAA TTGGTTCCAC TGGACGCGGT TAGCAGCAGG
GTGAAGCTTA TGCTGAAGGA AATGTCTAAG TAG
 
Protein sequence
MKASELFFPT LREVPSEAEV LSHQLLLRAG FIRKATAGVY SYLPLANRVL KKIMNIVREE 
MDRAGGQEVI LPIIQPAELW KKSGRWEVYG DEMFRLKDRH NRDFALGPTH EEIITTLVDA
DVHSYRHLPL LLYQIQNKYR DEIRPRFGLM RGREFIMKDL YSFDIDEEGL DISYHKMYEA
YNRIFQRLKL QYRVVEADSG AIGGNESHEF MVLAENGEAE IVYCKNCDYG ANTEKAVCSL
EEPKVTEEEQ LELEKVHTPG QRTIQDLVDY MNIPKEKQIK TLIYYADEEL VAAIVRGDRE
LNEIKFKNVL GCNQLFMADE TAVKQLCSAG FGSLGPVGLP LKTYIDLEVS QMKNFACGAN
EDDYHFINVN LGRDFTPAGI NDIRNAVAGD SCPVCSAPLY SMRGIEVGHI FKLGTKYSEV
LEANYLDQKG QEKPMVMGCY GIGISRTMAA AVEQSADENG IVWPLPITPF EVIIVPVNSK
NEEQMQAAWS LYEEFKQEGL ETIVDDRDER AGVKFKDADL IGIPLRITIG PRSLQEKQVE
VKKRSDKDIE LVPLDAVSSR VKLMLKEMSK