Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0892 |
Symbol | |
ID | 4282059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1009421 |
End bp | 1011133 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638137760 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_753581 |
Protein GI | 114566427 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000147274 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAAGCTT CAGAATTATT CTTTCCCACT TTGCGGGAGG TACCCAGCGA GGCTGAAGTC TTGAGTCACC AGTTGCTGTT GAGAGCCGGC TTTATAAGAA AGGCTACTGC AGGTGTTTAT AGCTATCTGC CTTTGGCCAA CCGGGTTCTC AAAAAAATAA TGAATATTGT CCGGGAAGAA ATGGACCGGG CCGGGGGCCA AGAAGTAATT TTGCCTATAA TCCAACCGGC GGAACTGTGG AAGAAATCAG GCCGTTGGGA GGTTTATGGC GATGAGATGT TTCGGCTAAA AGACCGGCAC AATCGCGATT TTGCTCTGGG ACCGACGCAC GAAGAAATAA TTACCACTCT GGTGGATGCT GATGTTCATT CCTACCGTCA CCTGCCTTTG CTGCTTTATC AGATACAGAA CAAATACCGG GATGAAATTA GGCCCCGTTT TGGCTTGATG CGCGGGCGGG AATTTATCAT GAAAGACCTC TACTCCTTTG ATATTGATGA GGAAGGATTG GATATTTCCT ATCACAAAAT GTACGAGGCC TATAATCGTA TATTCCAGAG ATTAAAGCTG CAATACCGGG TGGTGGAGGC TGACAGCGGG GCTATAGGCG GGAATGAAAG CCATGAATTC ATGGTTTTGG CGGAAAACGG CGAAGCCGAG ATAGTATACT GCAAAAACTG CGATTATGGA GCTAATACGG AAAAGGCGGT TTGTTCCCTA GAGGAACCAA AGGTTACAGA AGAAGAGCAG TTGGAACTAG AAAAGGTCCA TACCCCGGGA CAGAGAACCA TACAGGACCT GGTTGACTAT ATGAATATTC CCAAAGAAAA GCAAATAAAG ACCTTGATTT ATTATGCGGA TGAAGAGCTG GTGGCAGCAA TAGTACGAGG GGACCGTGAG CTAAACGAAA TCAAATTTAA GAATGTGCTG GGTTGCAATC AATTGTTTAT GGCGGATGAG ACCGCGGTTA AACAGCTTTG CAGCGCCGGT TTCGGTTCAC TGGGTCCGGT GGGACTGCCT TTGAAAACTT ATATCGACCT GGAAGTCAGT CAGATGAAGA ATTTTGCCTG TGGGGCCAAT GAAGATGACT ATCATTTCAT AAATGTAAAT CTGGGAAGAG ATTTTACGCC GGCCGGCATC AACGATATTC GCAATGCTGT TGCGGGCGAT AGCTGTCCGG TTTGTTCAGC TCCTTTATAC AGCATGCGGG GGATTGAGGT AGGACACATT TTTAAGCTGG GCACCAAGTA TTCTGAGGTT CTGGAGGCCA ATTATCTGGA TCAGAAGGGA CAGGAGAAGC CTATGGTTAT GGGTTGTTAT GGAATCGGCA TATCGCGTAC TATGGCTGCA GCCGTCGAAC AGAGTGCTGA TGAAAATGGT ATTGTCTGGC CGCTTCCCAT TACCCCCTTT GAAGTTATTA TTGTTCCGGT CAACAGCAAA AATGAGGAAC AGATGCAGGC GGCCTGGTCA CTTTATGAAG AGTTTAAACA AGAGGGATTG GAGACTATTG TTGACGACCG GGATGAAAGG GCGGGTGTAA AGTTCAAGGA TGCCGATCTC ATTGGGATAC CGCTGAGGAT TACTATTGGC CCTCGCTCTT TGCAGGAAAA GCAGGTAGAA GTTAAGAAAA GAAGCGATAA GGATATAGAA TTGGTTCCAC TGGACGCGGT TAGCAGCAGG GTGAAGCTTA TGCTGAAGGA AATGTCTAAG TAG
|
Protein sequence | MKASELFFPT LREVPSEAEV LSHQLLLRAG FIRKATAGVY SYLPLANRVL KKIMNIVREE MDRAGGQEVI LPIIQPAELW KKSGRWEVYG DEMFRLKDRH NRDFALGPTH EEIITTLVDA DVHSYRHLPL LLYQIQNKYR DEIRPRFGLM RGREFIMKDL YSFDIDEEGL DISYHKMYEA YNRIFQRLKL QYRVVEADSG AIGGNESHEF MVLAENGEAE IVYCKNCDYG ANTEKAVCSL EEPKVTEEEQ LELEKVHTPG QRTIQDLVDY MNIPKEKQIK TLIYYADEEL VAAIVRGDRE LNEIKFKNVL GCNQLFMADE TAVKQLCSAG FGSLGPVGLP LKTYIDLEVS QMKNFACGAN EDDYHFINVN LGRDFTPAGI NDIRNAVAGD SCPVCSAPLY SMRGIEVGHI FKLGTKYSEV LEANYLDQKG QEKPMVMGCY GIGISRTMAA AVEQSADENG IVWPLPITPF EVIIVPVNSK NEEQMQAAWS LYEEFKQEGL ETIVDDRDER AGVKFKDADL IGIPLRITIG PRSLQEKQVE VKKRSDKDIE LVPLDAVSSR VKLMLKEMSK
|
| |