Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0890 |
Symbol | |
ID | 4282057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1007314 |
End bp | 1008345 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638137758 |
Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
Protein accession | YP_753579 |
Protein GI | 114566425 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000919526 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACTA TTCTTATTAC CCTATTGATT ATTGCGGTGC TGATTCTGGC CCATGAATGG GGTCATTTTG TAGTGGCCCG TCGAATTGGC ATACCGGTTT ACGAGTTTGC CATAGGCTTT GGCCCCAAAG TATTCTCCTG GAAAAGAAAT GGGGTAATCT ATTCTCTGCG TTTGATTCCT TTAGGGGGCT TTGTGCGCAT GGCCGGGGAA GAGCCTGGTG ATCCCGAAGA ACCCAATGGT TTCAGCCATA GGACTCCCCT GGAAAAGATT CGGGTTTCCT TTGCCGGGCC TTTTATGAAC TTTGTTCTGG CCCTGCTGAT CTTTGTTTTC AGCTATAGTG TGATCGGCCT CCCCCATAGC TCCAACGAGC CTATAATTGG AACGGTAATC AAGGGGAAAC CGGCGGATTT GGCAGGCATC AAGGCCGGTG ACAGGATAAT TTCGGCGAAT GGTATTGCTG TAAACAGCTG GGCTGATTTT AACCAGCAGA CCTCCCGTAG CAGCGGCCAG CCCTTGGAGC TACAGCTGGA GCGAAAGCAG CAGCGGCTTA GCCTGGAGGT TTCGCCGGTA AAACTTGATT CTTCCGGCAA CATGGGTATT GGTGTTTTGA ACCGGGTGGT TTATGAGAAA CAGGGGATTT TAAAATCCAT GGAACTGGGC CTGAAACAAA CCTATGAACT TACTCTTCTG CTCTTTTCCG CTTTGGGAGT TCTAATAAGC GGCGGTGCCT CCATGGGTGA TTTGGCCGGT CCGGTGGGGA TAACGCGTCT GGTGGGTGAG TTTGCCCAGG TGGGCATGAT ATTCCTGCTT AACTTTACGG CTTTCTTAAG CATTAACCTG GGTATTATGA ACCTCTTGCC TATTCCGGCT CTGGACGGCA GTAAAATCGT ATTCGCCGTG GTGGAGGCCA TACGCAAGAA GCCTCTGGAC CCGGAAAAGG AAGGTTTTCT TAACTGGATA GGTTTTCTCT TTCTGATTGG TTTAATGATA ATTGTAACTT TTAATGATAT TGTAAGATGG ATAAGAGGAT AA
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Protein sequence | MNTILITLLI IAVLILAHEW GHFVVARRIG IPVYEFAIGF GPKVFSWKRN GVIYSLRLIP LGGFVRMAGE EPGDPEEPNG FSHRTPLEKI RVSFAGPFMN FVLALLIFVF SYSVIGLPHS SNEPIIGTVI KGKPADLAGI KAGDRIISAN GIAVNSWADF NQQTSRSSGQ PLELQLERKQ QRLSLEVSPV KLDSSGNMGI GVLNRVVYEK QGILKSMELG LKQTYELTLL LFSALGVLIS GGASMGDLAG PVGITRLVGE FAQVGMIFLL NFTAFLSINL GIMNLLPIPA LDGSKIVFAV VEAIRKKPLD PEKEGFLNWI GFLFLIGLMI IVTFNDIVRW IRG
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