| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0889 |
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| Symbol | |
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| ID | 4282020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 1005959 |
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| End bp | 1007188 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638137757 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_753578 |
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| Protein GI | 114566424 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000293372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGCATC CATGCTTCGC CAACGCTCGC TTGTATATTT ATACAACCTT TATGCAGGAG
AAGGAAGGTT TTATAATGAA CAAGAAGCAG TCTAATGTAA TTATTCTTGG CTCCACCGGC
TCCATTGGCA TACAAGCACT GGATGTAATC CGTATGCACT CTGATTCATT TAGAGTACTG
GGACTCGCGG CCAAGGATGA AGTTCAGCTT TTGCGGGAAC AGATCGAACT CTACCAGCCA
GAATATATTT CTTTGGCTGA TAAAGAAAGC ATAAAAAAGC TCGGAGAGCT GGGTGGCAGC
GGAGTTAAAA AAGCTCTGCC CGGGGTTGAA GGATTATGTG AATTAGCCAG TTTGCCTGAA
GCGGATATTG TGCTGGTAGC TTTGAGCGGA GCTATAGGTA TTTTGCCTAC CTTGGCGGCC
ATTGAGGCCC GGAAAAGGGT AGCTTTGGCC AATAAGGAAA CCCTGGTAGC TGCCGGGGAT
ATTGTAATGC AAGAAGCACG ACAGCAGGGA GCTTTAATTA TTCCGGTAGA CAGCGAACAT
TCAGCCATAT TCCAGTGCCT GGCAGGTGAA GCCCGGCATC TGCATCGGAT TTGGCTTACC
GCTTCCGGCG GTCCTTTCCG GGATTTTACC CGGGAACAAA TGAAAGCGGT TGATTTGGAG
ATGGCCTTGC AGCACCCTAA CTGGTCCATG GGACCTAAAA TAACCATTGA CTCGGCAACA
TTGATGAACA AGGGACTGGA GGTTATTGAG GCACATCATC TGTTTGGAGT GGGGTATAAT
GAAATTGAAG TCCTGCTTCA AGCCGAGAGT ATCATTCATT CCATGGTGGA ACTACAGGAT
GGAGCATTCC TGGCCCACCT GGGAAGACCC GATATGAGAA TACCTATACA GTATGCTTTA
ACTTATCCGG AGCGCATGGA GTCTCCGGTA GAAAGGCTGG ATTTCAGAAC GCTGGGGGCT
ATTCATTTTG GTCGCCCGGA TACCCAGGCT TTTCCCGCTC TGGCTCTGGC TTATGAAGCG
GGTAAAGCGG GAGGTACCAT GCCGGCCGTG CTGAATGCGG CCAATGAGGT GGCGGTAAAC
TCCTTTATGC AAAGAAGGAT AGATTTTGCC CGCATTCCTC TCCTGGTGGA AAGGGTTATG
GAAATGCATG ATATGGTGAA ACAGCCCGAC CTGGACAGTA TACTGGCAGC TGATGCCTGG
GCCCGGGTTC GTTGCGAGGA GCTTATATGA
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| Protein sequence | MLHPCFANAR LYIYTTFMQE KEGFIMNKKQ SNVIILGSTG SIGIQALDVI RMHSDSFRVL
GLAAKDEVQL LREQIELYQP EYISLADKES IKKLGELGGS GVKKALPGVE GLCELASLPE
ADIVLVALSG AIGILPTLAA IEARKRVALA NKETLVAAGD IVMQEARQQG ALIIPVDSEH
SAIFQCLAGE ARHLHRIWLT ASGGPFRDFT REQMKAVDLE MALQHPNWSM GPKITIDSAT
LMNKGLEVIE AHHLFGVGYN EIEVLLQAES IIHSMVELQD GAFLAHLGRP DMRIPIQYAL
TYPERMESPV ERLDFRTLGA IHFGRPDTQA FPALALAYEA GKAGGTMPAV LNAANEVAVN
SFMQRRIDFA RIPLLVERVM EMHDMVKQPD LDSILAADAW ARVRCEELI
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