| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0886 |
|---|
| Symbol | |
|---|
| ID | 4282017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1002926 |
|---|
| End bp | 1003699 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638137754 |
|---|
| Product | di-trans,poly-cis-decaprenylcistransferase |
|---|
| Protein accession | YP_753575 |
|---|
| Protein GI | 114566421 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000056248 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCATAA ATAAAAAAGG GAAACTGGAA GAGCTTATCG ACCAGAACAA TCTACCACAG
CATATAGCTA TAATCATGGA CGGCAATGGG CGCTGGGCCA ATAAACGACT TTTGCCTAGA
ACCATGGGGC ACCGGGCCGG TATGAGTTCC TTGAAGGAAG TGGTGCGGGC CTGTTCAGAT
GTAGGTGTAT CCACCCTAAC TGTCTTTGCT TTTTCTACGG AGAACTGGAA AAGGCCCCTG
CAGGAAGTTG ACTATCTCAT GAAGCTACTG GTGGAATATC TTCACCGGGA ATTGGAAGAA
TTACATGCCA ATGCAGTTCG TATTAATGTA CTGGGGGACT ATAATTCTTT GCCTCATCAA
TGCCAGCTGG AAATAACGGA GGCGCTGCAG ATTACTCGCA ATAATACGGG TTTAAAGTTT
AATATTGCCC TGAACTATGG CTCCCGTGCC GAGATTATAG CAGCAGTGAA GAAGCTGGCA
GCCGGTCTAT TGGCCGGGGA AATATGCCTG GAAGAGATTT CCGAGGAAAG CTTTGCTGCT
TGTTTAACCA CCTCCGGGAT GCCCGATCCG GACCTATTAA TAAGAACAGC AGGAGAGATG
CGAGTAAGCA ATTTTCTTCT CTGGCAGATT GCCTATACTG AGCTCTGGGT TACTGATTGC
CTGTGGCCGG ACTTTTCCCG GGAGCACCTT ATGCAGGCTA TTTGGGATTA CCAGCATAGA
GAAAGACGTT TTGGCGGGTT AAGTAGAAAC AAACAGGGGG AGGAGAATGT TTAA
|
|---|
| Protein sequence | MVINKKGKLE ELIDQNNLPQ HIAIIMDGNG RWANKRLLPR TMGHRAGMSS LKEVVRACSD
VGVSTLTVFA FSTENWKRPL QEVDYLMKLL VEYLHRELEE LHANAVRINV LGDYNSLPHQ
CQLEITEALQ ITRNNTGLKF NIALNYGSRA EIIAAVKKLA AGLLAGEICL EEISEESFAA
CLTTSGMPDP DLLIRTAGEM RVSNFLLWQI AYTELWVTDC LWPDFSREHL MQAIWDYQHR
ERRFGGLSRN KQGEENV
|
|---|
| |