| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0878 |
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| Symbol | |
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| ID | 4282009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 996574 |
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| End bp | 997356 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638137746 |
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| Product | putative RNA polymerase sigma factor |
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| Protein accession | YP_753567 |
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| Protein GI | 114566413 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0195691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCCG ATTTAAAGCC TGATCTCGCT ACATTATGGA TTCGACTAAA AGAGAATGAG
GATATTGAAG CCAGGGATCA GTTGATAATT CACTTTGCCC ATCTGGTTAA GTATGTAGCC
AGCCGTCTGG CTATTCATCT TTCTTCGCTG GTAGAATTGG ACGAGCTGAT TTCTTACGGG
ATTGAAGGTT TAATAGATGC TATTGAAAAA TTTGACCATA AACGAAATAT CAAGTTTGAA
ACCTATGCCA TTACCCGGAT AAGGGGTTCA ATGATAGACG GTTTGCGCTC CATGGATTGG
ATTCCCGTTT CTCTGCGGCA GAAAAGCAAG GAACTGGAAA AGGCCTATAT GAATGTTGAA
GCCAGGTTAG GTCGATCAGC CAGTGATGCG GAGGTGGCCG AAGAATTAGG CCTGAATCTT
GATGAATTCG CGGTACTCTT AAGGGATGTA GCTGCAACTA CGATAATATC TTTAGATGAC
TTTTTGCCGG GCGAAGATGG GGAACAAAAG AAACGGATGC TGGACTTGCT GGAAGACCAT
AACAGTATAA GTGCATCGGA AATAGTGGAG TTTAATGAGG TTAAGGATTT ACTAGCTAAA
GCTATTTCCC GTTTGCCGGA TAAAGAAAAA CTGGTGGTCT ATTTGTATTA TTACGAGGGC
TTAACCCTGA AGGAGATAGG GGCTACCATT AGCCTATCGG AATCACGGAT ATCCCAGTTG
CATACCAAGG CCATACTGAG GTTAAGAGGG AGTCTCAGTA AAAAGAAAAA CCTGGTGATA
TAA
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| Protein sequence | MKPDLKPDLA TLWIRLKENE DIEARDQLII HFAHLVKYVA SRLAIHLSSL VELDELISYG
IEGLIDAIEK FDHKRNIKFE TYAITRIRGS MIDGLRSMDW IPVSLRQKSK ELEKAYMNVE
ARLGRSASDA EVAEELGLNL DEFAVLLRDV AATTIISLDD FLPGEDGEQK KRMLDLLEDH
NSISASEIVE FNEVKDLLAK AISRLPDKEK LVVYLYYYEG LTLKEIGATI SLSESRISQL
HTKAILRLRG SLSKKKNLVI
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