Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0845 |
Symbol | |
ID | 4281958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 966424 |
End bp | 967212 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638137714 |
Product | transcriptional repressor CodY |
Protein accession | YP_753535 |
Protein GI | 114566381 |
COG category | [K] Transcription |
COG ID | [COG4465] Pleiotropic transcriptional repressor |
TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAA GTCTATTGGA AAAATCCAGA GCCATCAATA GGATTCTTCA AAAAATTGCG GGTCACCCGG TAAACTTTTT CGAGATAGCT GATGTACTAT GCAGGAACCT GGAATGTACG GTTTTTATAG TGGGCAGGAG GGGGCAAATA GGAGGTTATG CTTTTGCCGA AGGGGCTATA TGCCAGGAGA TACAGCAGTT GATTAAGCAT GCGGAGCGTT TTCCGGAGAG TTTTAACCAG GAATTGTTGA ATATTTTAGA AACCCAAACC AACATAATAC TAAAGGATGG GCGCAAATGC CTTTTTAACC CGGATAATGT CAACTGCAGT TGTTCAGCGC GAATTTGGTC CATTACCCCG GTCTTTGGTG GTGCCAGGCG GATTGGCACC CTGATTTTTA TGAGAGATAA AGTTAAATTT ACAGAGGAAG ATATTGTTTT AATCGAATAT GGAGCCATGG TGATGGCCAA TGAGATAATG CGCATCAGAA CAGAAAGGAT CGAGGAAGAA GCACGGAAAA AAGCCTCTGT GCAAATTGCC CTGGCTACTC TCTCCTATTC CGAAAAAGAA GCCATAGACC ACATCATCGC GGAGCTCAAG GGAAAAGAGG GATTGCTGGT GGCCAGCCGG ATTGCGGATA AGGTGGGAAT TACTCGTTCG GTGATAGTAA GTGCTCTGCG CAAATTTGAA AGCGCCGGGG TAATTGAATC ACGTTCATTG GGAATGAAAG GGACTTATAT CAAGGTATTA AATGATTACC TGTTCGAAGA ATTAAGGAAT CAGGCTTGA
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Protein sequence | MSKSLLEKSR AINRILQKIA GHPVNFFEIA DVLCRNLECT VFIVGRRGQI GGYAFAEGAI CQEIQQLIKH AERFPESFNQ ELLNILETQT NIILKDGRKC LFNPDNVNCS CSARIWSITP VFGGARRIGT LIFMRDKVKF TEEDIVLIEY GAMVMANEIM RIRTERIEEE ARKKASVQIA LATLSYSEKE AIDHIIAELK GKEGLLVASR IADKVGITRS VIVSALRKFE SAGVIESRSL GMKGTYIKVL NDYLFEELRN QA
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