Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0843 |
Symbol | |
ID | 4281956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 964438 |
End bp | 964974 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638137712 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_753533 |
Protein GI | 114566379 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.60508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTCAAG CAACCACCAT AATTGCGGTT AGAAAGGGCC AGCAGACCGC TATAGCTGGC GATGGGCAGG TAACCCTGGG TCAGAATACC ATAATGAAAC AAAATGCAAC AAAGATAAGA AGGCTCTATG AGGGAAAGGT AATAGCCGGT TTCGCCGGGG CGGTAGCTGA TGCCTTCACC CTTTTTGCCA AATTCGAAGA AAAGCTCAAA CAGGCTGGGG GCAACCTCAG TAAAGCAGCG GTGGAAATCG CCAGGGAATG GCGCTCAGAC CGAATTCTTC GCCGCCTTGA AGCCCTCTTG ATCGTAGCAG ATGCGGAGAA GATTTTTATT GTTTCCGGTA GCGGCGAATT AATAGAACCT GATGATGGAA TAGCTGCTAT TGGTTCGGGA GGAGCCTATG CTTTAGCCGC AGCCCGGGCC TTGAATGCTT TCAGCGAGCT TAATGCCCGG GAAATTGCCG TTGAATCCTT AAAAATAGCT TCTGGTATCT GTGTCTATAC CAATGAGCAG ATTTCAGTTG AAGTAATCGA AAAATAG
|
Protein sequence | MFQATTIIAV RKGQQTAIAG DGQVTLGQNT IMKQNATKIR RLYEGKVIAG FAGAVADAFT LFAKFEEKLK QAGGNLSKAA VEIAREWRSD RILRRLEALL IVADAEKIFI VSGSGELIEP DDGIAAIGSG GAYALAAARA LNAFSELNAR EIAVESLKIA SGICVYTNEQ ISVEVIEK
|
| |