Gene Swol_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0843 
Symbol 
ID4281956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp964438 
End bp964974 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content48% 
IMG OID638137712 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_753533 
Protein GI114566379 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.60508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCAAG CAACCACCAT AATTGCGGTT AGAAAGGGCC AGCAGACCGC TATAGCTGGC 
GATGGGCAGG TAACCCTGGG TCAGAATACC ATAATGAAAC AAAATGCAAC AAAGATAAGA
AGGCTCTATG AGGGAAAGGT AATAGCCGGT TTCGCCGGGG CGGTAGCTGA TGCCTTCACC
CTTTTTGCCA AATTCGAAGA AAAGCTCAAA CAGGCTGGGG GCAACCTCAG TAAAGCAGCG
GTGGAAATCG CCAGGGAATG GCGCTCAGAC CGAATTCTTC GCCGCCTTGA AGCCCTCTTG
ATCGTAGCAG ATGCGGAGAA GATTTTTATT GTTTCCGGTA GCGGCGAATT AATAGAACCT
GATGATGGAA TAGCTGCTAT TGGTTCGGGA GGAGCCTATG CTTTAGCCGC AGCCCGGGCC
TTGAATGCTT TCAGCGAGCT TAATGCCCGG GAAATTGCCG TTGAATCCTT AAAAATAGCT
TCTGGTATCT GTGTCTATAC CAATGAGCAG ATTTCAGTTG AAGTAATCGA AAAATAG
 
Protein sequence
MFQATTIIAV RKGQQTAIAG DGQVTLGQNT IMKQNATKIR RLYEGKVIAG FAGAVADAFT 
LFAKFEEKLK QAGGNLSKAA VEIAREWRSD RILRRLEALL IVADAEKIFI VSGSGELIEP
DDGIAAIGSG GAYALAAARA LNAFSELNAR EIAVESLKIA SGICVYTNEQ ISVEVIEK