Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0840 |
Symbol | |
ID | 4281953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 959931 |
End bp | 962015 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638137709 |
Product | DNA topoisomerase |
Protein accession | YP_753530 |
Protein GI | 114566376 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000150599 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAGGAA CTACACTGCT TATTGTAGAG TCAGCGGCCA AAGCCAGAAC CTTAGGGAAA TTTCTGGGCA AGGGCTATAA AATAAAAGCA TCGGTGGGGC ATGTTCGCGA CTTGCCCAAG AGCAAATTGG GAGTCGATGT GGAGAATGAT TTTGAACCCC AGTATATTAC TATTCGGGGC AAAGGAGATA TCCTGAAAGA GATTAAGGAC GAATCCCAAA AAGCCGGTCG CGTTTTACTA GCTACCGACC CCGATCGTGA AGGAGAAGCT ATAGCCTGGC ATTTGCAGAA TGCTATGAAA ATTCCGCCGG AGGAGAATTG CCGGATTGAA TTCCATGAGA TTACCCGTGA GGCGGTAAAG AAGGCCATTA AAAATTCGCG CCCGGTGGAT TTAAGCCGGG TGAATGCCCA GCAGGCCCGC CGGGTTTTGG ACCGCCTGGT AGGCTACAAC CTGAGCCCTT TGCTTTGGAA TAAGATTCGC AAGGGCCTGA GTGCGGGCAG GGTGCAATCA GTGGCTTTAA AGTTAATCTG TGATCGGGAA GAGGAAATAA AGAACTTCAT TCCCCAGGAA TATTGGACCG TAGATGCCAT TTTTAATGCT GCTAAGGGCA AGAATAGCAA ATTTACTGCT CGTCTGGCCA GCTACCAGGG GAAGAAAATC GAAATCAACA GTGATAAAGA GGTGGCAGCT ATAGGAGAAT ACCTTCAAGG CGCCAATTTT ACTGTGCTCA AAGTGGAAAG AAAGGAAAAA CGCAAGAACC CCAACCCCCC GTTTATTACC AGTACTTTAC AGCAGGAAGC TTCCCGGAGG CTTAATTTCT TCTCCAACCG TACTATGCGG GTAGCCCAAG AATTATATGA AGGTTTGGAA ATTGGTAAAG AGGGTACGGT AGGATTAATT ACCTATCTCA GAACTGATTC TACCCGGGTG GCCAGCTCGG CGCAAATGGA AGCCCTGGAC TTTATTAATT CTACCTTTGG AGCGGAATTT GCTCCGGACA AACCCAATGA ATATAAGAGT AGGAAATCAG CTCAGGATGC CCATGAAGCT ATTCGCCCAA CTTCCATCCA GCGGACTCCG GAGAGTGTAA AAGCGTTTTT AAGCCGGGAT CAGTATCGCT TATATCAATT AATATGGAAC CGCTTTGTTT CCAGTCAAAT GACCCCTGCG GTTTATGATA GTTTGACTGT GGATATCTCG GCTGGAGACT ACGGTTTCAG AGCCAGTTCA TCACAGCTTA AATTTATTGG CTACAAAAAA GTCTACAGCG ATAATGAAGA AGAAGAGCCA AAGAATAATA TTCCAGAGCT TAAAAAGGGA GAAGAACTTG CACTGCATGA GTTAAAGCCG GAGCAGCACT TTACGCAACC TCCACCCCGC TTTAGTGAGG CCAGTCTAAT TAAATTGCTG GAAGAAAAAA GTGTTGGCCG TCCCAGTACT TATGCTCCTA CCATAGATAC CATTTTAAAG CGTAATTATG TGGAAAGGCA GAACCGGCAG TTTATTCCCA CAGAATTGGG CTTTATTGTA GTGGATTTAC TCAAGGAGCA TTTCGCCAAT ATTCTGGATG TGGAATTTAC CGCCCGGATG GAAGGCGAAT TGGATTTGGT AGAGGAAGGC AAACTGGATT GGAAAAAGGT GGTACGCGAT TTTTATGAGC CGTTTCACTC TGACCTGGAG AAGGCCCGTG AGCTGGCCCA GAAGATTGAG ATCAAGGATG AAGAGGCTGG TAAAGAATGC CCGCAATGTG GAAGACCGAT GCTTATAAAA CACGGTCGAT TTGGTAAATT CATGGCTTGC TCGGGTTTTC CCGAATGTCG CCATACTCAA TCAATAAATC AGGAATTGGG ACTAAAATGC CCGCTTTGCC AGGGCTCTAT AGTGGCTTTG AAAAGCAAGA AAGGCCGGAC TTTTTATGGC TGCAGCAATT ATCCTCAGTG TAACTTCCGC TCCTGGGATA AACCAACGGG GAAAATTTGT CCCCATTGTG GAGACGCGAT AGTAGAAAAG TTCAATAAAA AGAAAGAAGC TACACAGATT TGCCAGAATC CCGCTTGCAA GCAGAAGGTG GAAATGGGGG GTTGA
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Protein sequence | MAGTTLLIVE SAAKARTLGK FLGKGYKIKA SVGHVRDLPK SKLGVDVEND FEPQYITIRG KGDILKEIKD ESQKAGRVLL ATDPDREGEA IAWHLQNAMK IPPEENCRIE FHEITREAVK KAIKNSRPVD LSRVNAQQAR RVLDRLVGYN LSPLLWNKIR KGLSAGRVQS VALKLICDRE EEIKNFIPQE YWTVDAIFNA AKGKNSKFTA RLASYQGKKI EINSDKEVAA IGEYLQGANF TVLKVERKEK RKNPNPPFIT STLQQEASRR LNFFSNRTMR VAQELYEGLE IGKEGTVGLI TYLRTDSTRV ASSAQMEALD FINSTFGAEF APDKPNEYKS RKSAQDAHEA IRPTSIQRTP ESVKAFLSRD QYRLYQLIWN RFVSSQMTPA VYDSLTVDIS AGDYGFRASS SQLKFIGYKK VYSDNEEEEP KNNIPELKKG EELALHELKP EQHFTQPPPR FSEASLIKLL EEKSVGRPST YAPTIDTILK RNYVERQNRQ FIPTELGFIV VDLLKEHFAN ILDVEFTARM EGELDLVEEG KLDWKKVVRD FYEPFHSDLE KARELAQKIE IKDEEAGKEC PQCGRPMLIK HGRFGKFMAC SGFPECRHTQ SINQELGLKC PLCQGSIVAL KSKKGRTFYG CSNYPQCNFR SWDKPTGKIC PHCGDAIVEK FNKKKEATQI CQNPACKQKV EMGG
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