Gene Swol_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0839 
Symbol 
ID4281952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp958730 
End bp959818 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content44% 
IMG OID638137708 
ProductDNA uptake Rossmann fold nucleotide-binding protein 
Protein accessionYP_753529 
Protein GI114566375 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00754519 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGAA CAGAAAAAGC CGCTTTGTGT TTTCTCCATG CAATTAAAGG AATAGGCAGC 
AAAAGCCTTT GGAAAATTAA AGACAGCTTT GGCAGTTTTG AGAACTGCCT GAAATCTGAT 
TCATCTCGTT TGTATGCTCT GCTCAAGAGC GAAATAGCTC AGGCTATTAT TTCCCAACGC 
CAGAATAGTA GTATATTTTT TTATTTGGAG CGGTTGGAGA ATGAGGGGAT CAACCCGATG 
GGTTTTGAGG AATCCGCCTA TCCATCAAGC TTAAGAAATA TTTATAATCC ACCGATGCTG 
CTTTATTTTC AGGGTAATAT GGATTGTGTT AAAAAAATCT GTCTGGCCGT TGTTGGCTCC 
CGAGCGGCCA GTGATTATGG CCGGACTACA GCCAGGAAAC TGGGCCATCA ACTGGCTACA 
CGGGGGATAA GTGTGGTAAG TGGCATGGCT CGGGGGATTG ATACGGAAGC TCATCGTGGA 
ACTCTTGATG CCAGGGGCAA AACCATAGCA GTATTGGGGA GCGGTCTTAA TATTATTTAC 
CCCCGGAGCA ATAAGCGCTT ATTTCATGAA ATAATTGAGC AAGGAGTGGT TATTAGCGAG 
TTTCCCCTGG ATACTAACCC TGAACCGGGG AATTTTCCCA TGCGTAACCG CATAATATCC 
GGTATAAGCC GTGGGGTGGT TGTGGTCGAA GCCCGGGTCA AAAGTGGGGC TTTGATTACA 
GCGGATTATG CTCTGGAGCA GGGAAGGGAT GTATTTGCTG TTCCCGGGCC GATTAATCGG 
GAAAGCAGTA TGGGGGCTAA TAATTTAATC AAACAAGGGG CCAAATTGAT TACAGGGGTT 
GAAGATATTA TTGAGGAGTA TTATGATATC ACAATACCGG AAAAAGAGCT TCCGCTACAG 
GAACAGCTAC TTTTTTTGGA TGAGCAGGAA AAAGTCGTTG TAAACTGCCT GGCTGGAGAT 
CCCCTGCTTT TTGATGATAT AATAGCCAGT ACCGGTTTTA ACATAGGGGA ACTCAGCCGC 
CTTTTATTGA AACTGGAATT GGCAGGCATA GTAAAGTCTT TGCCGGGTAA TTACTATGTT 
AAAGTATGA
 
Protein sequence
MIRTEKAALC FLHAIKGIGS KSLWKIKDSF GSFENCLKSD SSRLYALLKS EIAQAIISQR 
QNSSIFFYLE RLENEGINPM GFEESAYPSS LRNIYNPPML LYFQGNMDCV KKICLAVVGS 
RAASDYGRTT ARKLGHQLAT RGISVVSGMA RGIDTEAHRG TLDARGKTIA VLGSGLNIIY 
PRSNKRLFHE IIEQGVVISE FPLDTNPEPG NFPMRNRIIS GISRGVVVVE ARVKSGALIT 
ADYALEQGRD VFAVPGPINR ESSMGANNLI KQGAKLITGV EDIIEEYYDI TIPEKELPLQ 
EQLLFLDEQE KVVVNCLAGD PLLFDDIIAS TGFNIGELSR LLLKLELAGI VKSLPGNYYV 
KV