Gene Swol_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0823 
Symbol 
ID4281918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp940602 
End bp941576 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content47% 
IMG OID638137693 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_753514 
Protein GI114566360 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000275224 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGAATT ATTTGAGTAA TGCATTTTTG GCAGCAGCTA TTGCCATAGT TGTATCAATA 
ATAATGGGAC CTATAATGAT ACCATTTCTT AAACGGCTTA AAGTAGGGCA GAGTATTAGA 
GAGGAAGGCC CCAAAGGCCA CTATGCCAAA GCAGGCACCC CCACCATGGG GGGTATAATT 
ATTATTACCG CGGTAATGCT GGCCAGCTTC ATTATGGCAG GTACCAGTAC TGAAGCCCTG 
GCAGCGGTGC TGCTAATGCT GGCATTCGGT TCGGTAGGCT TTTGGGATGA CTATATCAAG 
GTGGTATTGA AACGTTCCCT GGGGCTTCGT GCCCGAGAAA AACTAGGATT GCAGCTCCTG 
ATAGCATTTC TTTTCGGGCT TTTGCTGATT CTTTATTTTA AACGGGGAAC CGCTATACTT 
ATACCCTTTA CCGGCCATGC AGTGGATCTT GGTTGGTGGT ATCTTCCCTT CATTGTTTTT 
GTTGTGGTGA GTACTGCCAA TGCGGTGAAT CTTACTGATG GTCTGGATGG ACTGGCTTCC 
GGGGTAAGCT TTTTTGTAAG CCTGGCTCTG GCGGTTATTT GCGTTATGAC AGGACATTAT 
AGCCTGAGTG TTTTTTGCGG CGCACTGGCC GGAGCTTGCC TGGGCTTTCT AGTATTTAAC 
CGCCATCCCG CTCGGGTTTT TATGGGAGAT ACCGGTTCTA TGGCCCTGGG AGGAGCAGTG 
GCTGCTGTGG CGGCCTTAAC CCGCTCGGAA ATAGCTTTGA TTATTATTGG CGGGGTCTAT 
GTGATTGAAA CCTTAAGTGT TATCTTACAG GTTATATCCT ACCAAACTAC GAGAAAGAGG 
ATATTTCGCA TGGCTCCCTT GCATCACCAT TATGAGTTGA AAGGCTGGCC GGAAACCAGG 
GTGGTAAGAT ATTTCTGGGG CCTTTCCTTT GTTTTTATGC TCCTGGGGAT TTGGAGCTTT 
TGGGGAGTAG GCTAA
 
Protein sequence
MQNYLSNAFL AAAIAIVVSI IMGPIMIPFL KRLKVGQSIR EEGPKGHYAK AGTPTMGGII 
IITAVMLASF IMAGTSTEAL AAVLLMLAFG SVGFWDDYIK VVLKRSLGLR AREKLGLQLL 
IAFLFGLLLI LYFKRGTAIL IPFTGHAVDL GWWYLPFIVF VVVSTANAVN LTDGLDGLAS 
GVSFFVSLAL AVICVMTGHY SLSVFCGALA GACLGFLVFN RHPARVFMGD TGSMALGGAV 
AAVAALTRSE IALIIIGGVY VIETLSVILQ VISYQTTRKR IFRMAPLHHH YELKGWPETR 
VVRYFWGLSF VFMLLGIWSF WGVG