Gene Swol_0814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0814 
Symbol 
ID4281841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp930339 
End bp931007 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content46% 
IMG OID638137685 
ProductHhH-GPD 
Protein accessionYP_753506 
Protein GI114566352 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0231377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAC AGAAGTTAAT GGCTATATAT CACAAGCTTT TTGAGCATTT TGGTCCACGG 
GGATGGTGGC CGGGGGAAAG CCGCCTGGAA ATAATACTGG GTGCAATACT GACCCAGGCG 
GTCTCCTGGA AAAATGTAGA GAAGGCTATT GCGGCTCTTA AAGAGGCCAG GTTGCTCGAT 
TTTCCCGCCT TGCGATCAAT CGCAGAAGAA GAACTGGCAG ATTTCATCAA ACCAGCCCTT 
TATCATCGCC AAAAAGCTCG CAGATTGAAA ATTTTGTTGG ATTTTATCGC TGAGAATTAT 
GGTGGTGATA TTGACCTCAT GTTTAGCGAG CCCCTGCCGC AAATTAGAGC GAGGCTTCTG 
GCCTTGTGGG GAATAGGCCC GGAGACTGCC GATTCCATTT TGCTTTATGC TGGCAATTAC 
CCGGTTTTTG TGGTCGATGC TTATACTATT CGAATATTTA CCCGACTGGG GTGGGTGGAA 
GATAAGTGTT CTTATGAGAA GATGCAGGGA TTGATGCAGA ACCACCTGCC GGTTGATACC 
CAAATTTATA ACGAATATCA TGCTTTGTTG GTAGCCTTGG GGGCCAATTA TTGCAAGAAA 
AAAAAGGCGC TTTGTCAAGA ATGCCCCCTG GCGGAGTATT GCCCATACAT TAGAAAAGTT 
GAGGGGTGA
 
Protein sequence
MKQQKLMAIY HKLFEHFGPR GWWPGESRLE IILGAILTQA VSWKNVEKAI AALKEARLLD 
FPALRSIAEE ELADFIKPAL YHRQKARRLK ILLDFIAENY GGDIDLMFSE PLPQIRARLL 
ALWGIGPETA DSILLYAGNY PVFVVDAYTI RIFTRLGWVE DKCSYEKMQG LMQNHLPVDT 
QIYNEYHALL VALGANYCKK KKALCQECPL AEYCPYIRKV EG