| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0805 |
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| Symbol | |
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| ID | 4281832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 917508 |
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| End bp | 920306 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638137676 |
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| Product | single-stranded DNA-specific exonuclease-like protein |
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| Protein accession | YP_753497 |
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| Protein GI | 114566343 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00139649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAATT GGATAAATGG GAAATATGAT GAAACAATAG TGGAAAAAAT AGCTGAGGAA
CTGGGGATTT CCTGCCTGCT GGCCAGAATA CTGGTGAAGC GGGGGATAAG TGAAACTGAG
GAGGCCAACC GGTTTTTGTA TGGGAAGCTG GAGGACTTGA ATGACCCCTT CCAGCTTAAA
GATATGGATT TGGCGGTGGC CAGGATAGAG CAGGCCATAG CGGCGGGCGA AAAGATAGTG
GTCTATGGGG ACTATGATGT TGATGGAGTA TGCAGTATTG TTATATTACT GGAATGCCTG
CAGCTGCTGG GAGCTAATTG TAGTTATTAT GTCCCTGACC GCTTCTTAGA GGGTTATGGA
TTAAATAGTG ATGCTATAGA AAAGCTGGCC AGTGAAGGCT GCCAGCTATT GATAACTGTG
GATTGCGGTA TATCATCACT GGCGGAAGGC CAGCTGGCTT GTGATTTGGG AATGGATCTT
ATAATAACCG ACCACCATAG ACCGCTGGAT AAGCTTCCTC CGGCCGTGGC CATAATCAAC
CCCAAGCTGG GGGGAGGAGC AGGGAGCAGT GACCTGGCGG GGGCGGGGGT GGCCTTTAAC
CTGGCAGCAG CCCTGTGGCG GGGAAGGATG GAGCAGGAAA AGCTCTACAA CTGGCTGGAG
CTGGTAGCCC TGGCTACGGT AGCGGATATT GTCCCGCTGC GGAGCGACAA CCGGATAATG
GTTAAGTATG GCTTGAAAAA GATTGGGCAG ACGAGCCGCA AAGGCTTACG GGCCCTACTG
CGGGAAACAG CCCTGGAAGG CAAGAACCTC AGGACCTGGC ACATAGCTTT CGTGTTGGGT
CCACGATTGA ATTCAGCCGG GAGGCTTAAT AGCGCCAGAA ATAGTATTGA ATTGCTTCTA
GCCCAGGATG AAAAAAGGGC CGCTTCGATG GCGGCGTTTT TATGCCGGGT TAATGAAGAG
AGAAAAAGGA TTGAGGAGAC GATATTTCGG GAAGCAGTGG CAGAAATCGA ACAGCATATT
GACCTGGAGA AGGACCCAAT ACTTTTATTA GGTGGAGAAA AATGGCATGA CGGGGTTATT
GGCATAGTGG CCTCGCGCCT CAATGAACAC TACCGGAGGC CTTGTATTTT AATTTCCTGG
GAGGGTGACT GCGGAAGGGG ATCAGCCCGC AGCATAGCAG GAATTGATAT ATTTGCGGCC
CTTGATTACG CTAGCGGTTT TTTGCAGCAA TTTGGGGGGC ACAAAATGGC GGCCGGTTTA
AGGTTGGAGC GCAGGAATTT TCCTGCTTTT AAAGAAAAAA TCCTGGAATG GGCGGCAACT
CAAGAGCTTT CCTCGCTTAA ACCTTCTGAG CGAAAGATAG ATGCTGAAAT CAAGCCGGCT
GACATTAATG AAGCCTTACT AAAAGAACTG GAGCTTTTGC AGCCTTGCGG AGAAGGTAAT
CCGGTACCGC TATTTTTATT GCGCCAGGTA TCTATTAACT CGGCTGCTCT GATAGGCAAA
GGGCGGGAAC ATTTCAAAAT CAAAACGGAA CCGGACGAAC TGGAGGGTAT AGCTTTCAAC
CAAGCGCAAT ATATGGAATT ACCGTGGCGA AATTCCTGTC AGGACCTGCT CTTTGAATTG
ACGGAAAATG AATATCAGGG CCGGAAAAGA ATACAGCTCA AAGTGAAAGA CATGAAATGC
AGCTTTATGC CGGACAGGAT CGGCACAGCC CAGGACAGCC TGCAGAGAGC TGCAGAGCTA
TTGGCCGCTA GTATGGAGGA ATTGAAAAAG GGCCGGCCTG TTCTTTTTAT CTATCCTACA
TCCCGGATAC TAAAGCGCAG CCTGGTTGTT TTGGAGAATT ATTTTCAAAG GACAGCTTTA
CAAGCGTTGC ACGGTTTGAT GAATATCGGC GAGAGACGGG AGACGGTAAA TATGTTCCGG
CAGGGACGGC CCCGAATCTA TCTGATGACC CGGGCATATT GCCGGTATTA TTTAAGAAAA
AACCCCTTCC CCCAAAACCT CCGCCTTGTT CTGGAGCTAT GGGGGGGAAA GTTAAAGGAA
CTGGAATATA ATCGAGAAAT TCGATGGGAA GCGTTATATC CCCCGACAGC AGAACTCTGC
TGGCAGAGAA CAGAGCGGGT GATGGACTCC TCTTCCCCTA CCTGGATATA TACCAATCGA
AAAAGGACGG TGGAAAGCTT AAGACAGCGA TGGCCCCAGG CCGTTGTTCA AACCGGAATA
AGGGAGCTTG AACAGCTGCG AAGCTTATAC CATTCAGGCC TTAAGGCTGG AGCCTCTGTA
TTCTTATCGG ATGGGGTATT CGCTGGTATA TTTCCCCGAA ACAGGCTTAA CGCAAGGCTG
TTTTTTGCCG ATGTTCCTTT TAGTATTTAT GAAGCTTTTT CCGTTCGGGG ACAAATGGCT
GCCGGCAGCG AGGAACCGGT GGCAGCTTTG TTTGATAACC AGGATATAAA AAGCAATTGG
GATTACCTAA ATCAGGCCTA TCCTGATTTG GCGGAAATTA AAGCTTGGTT GCGCCAGTTG
ATTGACTTGC GGCAAAATCC AATTTATCTC GATTTGAACA ACTGGCCGGT AACAGTGGAA
AGATTTCCCC GGGGAAAACT ACTGTCGGTT CTGCTCATAT TGAGCGATCT AGACTTGTGT
CGTTGGCGAA AAGAAGGTAG TATTATTGAA ATAAAGCTAC ATAAGCCTGA CAGCTCTACG
ATTAATCTCG CCAATTCGCC TTATTATCTG GAAGGACAGG CGGAAAAAAA GCACTATCAA
AACCTGGCAA GTCAAATTGA GAAATCTCTA AAATGGTGA
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| Protein sequence | MRNWINGKYD ETIVEKIAEE LGISCLLARI LVKRGISETE EANRFLYGKL EDLNDPFQLK
DMDLAVARIE QAIAAGEKIV VYGDYDVDGV CSIVILLECL QLLGANCSYY VPDRFLEGYG
LNSDAIEKLA SEGCQLLITV DCGISSLAEG QLACDLGMDL IITDHHRPLD KLPPAVAIIN
PKLGGGAGSS DLAGAGVAFN LAAALWRGRM EQEKLYNWLE LVALATVADI VPLRSDNRIM
VKYGLKKIGQ TSRKGLRALL RETALEGKNL RTWHIAFVLG PRLNSAGRLN SARNSIELLL
AQDEKRAASM AAFLCRVNEE RKRIEETIFR EAVAEIEQHI DLEKDPILLL GGEKWHDGVI
GIVASRLNEH YRRPCILISW EGDCGRGSAR SIAGIDIFAA LDYASGFLQQ FGGHKMAAGL
RLERRNFPAF KEKILEWAAT QELSSLKPSE RKIDAEIKPA DINEALLKEL ELLQPCGEGN
PVPLFLLRQV SINSAALIGK GREHFKIKTE PDELEGIAFN QAQYMELPWR NSCQDLLFEL
TENEYQGRKR IQLKVKDMKC SFMPDRIGTA QDSLQRAAEL LAASMEELKK GRPVLFIYPT
SRILKRSLVV LENYFQRTAL QALHGLMNIG ERRETVNMFR QGRPRIYLMT RAYCRYYLRK
NPFPQNLRLV LELWGGKLKE LEYNREIRWE ALYPPTAELC WQRTERVMDS SSPTWIYTNR
KRTVESLRQR WPQAVVQTGI RELEQLRSLY HSGLKAGASV FLSDGVFAGI FPRNRLNARL
FFADVPFSIY EAFSVRGQMA AGSEEPVAAL FDNQDIKSNW DYLNQAYPDL AEIKAWLRQL
IDLRQNPIYL DLNNWPVTVE RFPRGKLLSV LLILSDLDLC RWRKEGSIIE IKLHKPDSST
INLANSPYYL EGQAEKKHYQ NLASQIEKSL KW
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