Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0792 |
Symbol | |
ID | 4282769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 902657 |
End bp | 904645 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638137663 |
Product | hypothetical protein |
Protein accession | YP_753484 |
Protein GI | 114566330 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTGGAT GCCCTGGGTA TGGAAAAAAA GAAGTTATAG GCCGCTATAT TCTTGATATA ATACCCGAAT CCCGCCTGCC GGAAGTTCTG CAAAGCGGGC GTATACACGA AGCTGATATT TGGAGCGTTA ACGGTCGTGA TACCATTGTC ACCCGCCTGC CCATTATCAA GAATGGCAAA ATTATTGGCG CCATTGCCAA AAGTCTTTTT CTGGACGTGT CCGGAGCCAA AATGATGTTA AAAAAGCTGC AGGAAACCCA GCAAGAATTT CAGGCTCTAT TCGAAGCCTT GATTGAAAGC CCTTATATGG TCTATGTTAT CGTGGACAAG AATGGTTTTA TCACCAATAT GAACAAAACC TATTTGGATG CTTTAGCTTT GGACCGGGGT GAGGTGGTAG GAAAACACAT CTTAGAAATA ATACCCGAAT CCAAACTACC CGAAATTCTT AGTACCGGGC GCATAGACAA AGCTGACATC TGGCCCATTA ACGGGCGTGA TACAATCGTG ACCCGCCTCC CTATTATAAA GGATGATAAA ATTATCGGTG CCATTGCCAA GAGTCTTTTC CTGGATATGT CCGGGGCCAG GATTTTGATG CACCGCTTGC AGGAAACGGA AAAGGAGTTC CGGGCTATCT CCGAAGCCCT AATTGAATGT CCTTATATGG TTTATGTCAT AGTGGACAAA GACGGCATCA TCACCTCCAT CAACCAGACT TACCTGGATG CACTGGGTAT GGAAAAAAGT GAGGTAGTGG GAAAACATAT CAGCAAAATA ACCCCCACTT CCCTCTTGCC GGAAGTGCTT AAAACCAGGC AAATAGATCT GGCCGATATC TATACCATCA ACGGGCAGGA CACTATAGTA ACCCGGTTGC CTATTATCAA AGACGGGGAA ATAATTGGAG CCATTGCCCG GAGCCTGTTT ATGGATATCT CCGGCGCCAA AATCCTCATG AACAAATTAC AGGAAACCAA AAAAGAACTT AATATTTATA GAGAAGAACT GCGGCAGGGC TACCAGGCCA AATGGCAATT TAAAGATTTA ATCGGCCAAT CACCCGCCTT TTTAAAAGTT AAATCAGTGG CCGAACAAGT ATCCCATAGC GTTTCCACCT TGCTCATAAC CGGTGAAAGC GGTACCGGCA AGGAATTATT TGCCCATGCC ATTCACAACT CCAGCGACCG GAGCAGCTAT CCCTTTGTCA TGATAAATTG TGCCGCCTTG CCCGATAGTC TCCTGGAGTC CGAGTTGTTT GGCTATGAAG AAGGAGCTTT TACCGGAGCC AGGAAAGGCG GAAAACCCGG CAAATTTGAA TTGGCCATGG GTGGAACCAT TTTCCTGGAT GAAATAGGCG ATATGCCCTT AAGCATGCAG ACCAGGCTAT TAACCGTATT ACAGGACCGT ATGGTAGAAA GAATCGGCGG AACCCGGCCC ATTTATATTG ATGTGCGGGT AATAGCCGCT ACCAACCGTG ATCTGGAAGA ATTGGTGGCC AATAATAAAT TCCGCCAGGA CCTTTATTAC CGCTTAAATG TAGTCCGCCT GGACATCCCC CCGCTGAGAG AACGCAGCGA AGATATTCCC CTCCTGGCAA AAAATTTGAT AAAAAAGATT AACCAAAAAT TAGGTACCAA AATCAATAAG ATTTCCTATA AAACCATTGA ACTTATGCAG AATTACGGCT GGCCCGGCAA TGTACGGGAA TTAGAGAATC TGCTGGAGAG AGCCCTCAAC CTGGCGGATA TGAACCGGGA AAACAGCATC ACCATAAAGC ACTTCCCTCT TATGGTGGAA AACACTTATT TCCGGGATGA GCCGAATCCC TCTACCCTTC CGGACGCCAT TGAACAACTG GAAAAACAGC TGATTATTCA AGCGCTGGAG AAAACCAACG GCAATAAAAT GCAAGCCGCC AAAGTTCTGG GTATTTACAC TTCGGCACTT TACCGGAAAA TAAGCAAATA CGGCCTGGAT GAGCTGTAA
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Protein sequence | MSGCPGYGKK EVIGRYILDI IPESRLPEVL QSGRIHEADI WSVNGRDTIV TRLPIIKNGK IIGAIAKSLF LDVSGAKMML KKLQETQQEF QALFEALIES PYMVYVIVDK NGFITNMNKT YLDALALDRG EVVGKHILEI IPESKLPEIL STGRIDKADI WPINGRDTIV TRLPIIKDDK IIGAIAKSLF LDMSGARILM HRLQETEKEF RAISEALIEC PYMVYVIVDK DGIITSINQT YLDALGMEKS EVVGKHISKI TPTSLLPEVL KTRQIDLADI YTINGQDTIV TRLPIIKDGE IIGAIARSLF MDISGAKILM NKLQETKKEL NIYREELRQG YQAKWQFKDL IGQSPAFLKV KSVAEQVSHS VSTLLITGES GTGKELFAHA IHNSSDRSSY PFVMINCAAL PDSLLESELF GYEEGAFTGA RKGGKPGKFE LAMGGTIFLD EIGDMPLSMQ TRLLTVLQDR MVERIGGTRP IYIDVRVIAA TNRDLEELVA NNKFRQDLYY RLNVVRLDIP PLRERSEDIP LLAKNLIKKI NQKLGTKINK ISYKTIELMQ NYGWPGNVRE LENLLERALN LADMNRENSI TIKHFPLMVE NTYFRDEPNP STLPDAIEQL EKQLIIQALE KTNGNKMQAA KVLGIYTSAL YRKISKYGLD EL
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