Gene Swol_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0792 
Symbol 
ID4282769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp902657 
End bp904645 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content46% 
IMG OID638137663 
Producthypothetical protein 
Protein accessionYP_753484 
Protein GI114566330 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTGGAT GCCCTGGGTA TGGAAAAAAA GAAGTTATAG GCCGCTATAT TCTTGATATA 
ATACCCGAAT CCCGCCTGCC GGAAGTTCTG CAAAGCGGGC GTATACACGA AGCTGATATT
TGGAGCGTTA ACGGTCGTGA TACCATTGTC ACCCGCCTGC CCATTATCAA GAATGGCAAA
ATTATTGGCG CCATTGCCAA AAGTCTTTTT CTGGACGTGT CCGGAGCCAA AATGATGTTA
AAAAAGCTGC AGGAAACCCA GCAAGAATTT CAGGCTCTAT TCGAAGCCTT GATTGAAAGC
CCTTATATGG TCTATGTTAT CGTGGACAAG AATGGTTTTA TCACCAATAT GAACAAAACC
TATTTGGATG CTTTAGCTTT GGACCGGGGT GAGGTGGTAG GAAAACACAT CTTAGAAATA
ATACCCGAAT CCAAACTACC CGAAATTCTT AGTACCGGGC GCATAGACAA AGCTGACATC
TGGCCCATTA ACGGGCGTGA TACAATCGTG ACCCGCCTCC CTATTATAAA GGATGATAAA
ATTATCGGTG CCATTGCCAA GAGTCTTTTC CTGGATATGT CCGGGGCCAG GATTTTGATG
CACCGCTTGC AGGAAACGGA AAAGGAGTTC CGGGCTATCT CCGAAGCCCT AATTGAATGT
CCTTATATGG TTTATGTCAT AGTGGACAAA GACGGCATCA TCACCTCCAT CAACCAGACT
TACCTGGATG CACTGGGTAT GGAAAAAAGT GAGGTAGTGG GAAAACATAT CAGCAAAATA
ACCCCCACTT CCCTCTTGCC GGAAGTGCTT AAAACCAGGC AAATAGATCT GGCCGATATC
TATACCATCA ACGGGCAGGA CACTATAGTA ACCCGGTTGC CTATTATCAA AGACGGGGAA
ATAATTGGAG CCATTGCCCG GAGCCTGTTT ATGGATATCT CCGGCGCCAA AATCCTCATG
AACAAATTAC AGGAAACCAA AAAAGAACTT AATATTTATA GAGAAGAACT GCGGCAGGGC
TACCAGGCCA AATGGCAATT TAAAGATTTA ATCGGCCAAT CACCCGCCTT TTTAAAAGTT
AAATCAGTGG CCGAACAAGT ATCCCATAGC GTTTCCACCT TGCTCATAAC CGGTGAAAGC
GGTACCGGCA AGGAATTATT TGCCCATGCC ATTCACAACT CCAGCGACCG GAGCAGCTAT
CCCTTTGTCA TGATAAATTG TGCCGCCTTG CCCGATAGTC TCCTGGAGTC CGAGTTGTTT
GGCTATGAAG AAGGAGCTTT TACCGGAGCC AGGAAAGGCG GAAAACCCGG CAAATTTGAA
TTGGCCATGG GTGGAACCAT TTTCCTGGAT GAAATAGGCG ATATGCCCTT AAGCATGCAG
ACCAGGCTAT TAACCGTATT ACAGGACCGT ATGGTAGAAA GAATCGGCGG AACCCGGCCC
ATTTATATTG ATGTGCGGGT AATAGCCGCT ACCAACCGTG ATCTGGAAGA ATTGGTGGCC
AATAATAAAT TCCGCCAGGA CCTTTATTAC CGCTTAAATG TAGTCCGCCT GGACATCCCC
CCGCTGAGAG AACGCAGCGA AGATATTCCC CTCCTGGCAA AAAATTTGAT AAAAAAGATT
AACCAAAAAT TAGGTACCAA AATCAATAAG ATTTCCTATA AAACCATTGA ACTTATGCAG
AATTACGGCT GGCCCGGCAA TGTACGGGAA TTAGAGAATC TGCTGGAGAG AGCCCTCAAC
CTGGCGGATA TGAACCGGGA AAACAGCATC ACCATAAAGC ACTTCCCTCT TATGGTGGAA
AACACTTATT TCCGGGATGA GCCGAATCCC TCTACCCTTC CGGACGCCAT TGAACAACTG
GAAAAACAGC TGATTATTCA AGCGCTGGAG AAAACCAACG GCAATAAAAT GCAAGCCGCC
AAAGTTCTGG GTATTTACAC TTCGGCACTT TACCGGAAAA TAAGCAAATA CGGCCTGGAT
GAGCTGTAA
 
Protein sequence
MSGCPGYGKK EVIGRYILDI IPESRLPEVL QSGRIHEADI WSVNGRDTIV TRLPIIKNGK 
IIGAIAKSLF LDVSGAKMML KKLQETQQEF QALFEALIES PYMVYVIVDK NGFITNMNKT
YLDALALDRG EVVGKHILEI IPESKLPEIL STGRIDKADI WPINGRDTIV TRLPIIKDDK
IIGAIAKSLF LDMSGARILM HRLQETEKEF RAISEALIEC PYMVYVIVDK DGIITSINQT
YLDALGMEKS EVVGKHISKI TPTSLLPEVL KTRQIDLADI YTINGQDTIV TRLPIIKDGE
IIGAIARSLF MDISGAKILM NKLQETKKEL NIYREELRQG YQAKWQFKDL IGQSPAFLKV
KSVAEQVSHS VSTLLITGES GTGKELFAHA IHNSSDRSSY PFVMINCAAL PDSLLESELF
GYEEGAFTGA RKGGKPGKFE LAMGGTIFLD EIGDMPLSMQ TRLLTVLQDR MVERIGGTRP
IYIDVRVIAA TNRDLEELVA NNKFRQDLYY RLNVVRLDIP PLRERSEDIP LLAKNLIKKI
NQKLGTKINK ISYKTIELMQ NYGWPGNVRE LENLLERALN LADMNRENSI TIKHFPLMVE
NTYFRDEPNP STLPDAIEQL EKQLIIQALE KTNGNKMQAA KVLGIYTSAL YRKISKYGLD
EL