| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0727 |
|---|
| Symbol | |
|---|
| ID | 4283731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 831887 |
|---|
| End bp | 832795 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638137600 |
|---|
| Product | carbohydrate oxidoreductase, putative |
|---|
| Protein accession | YP_753421 |
|---|
| Protein GI | 114566267 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAGGA AACACATATC AGGGGAGGAA AAATTAATGA AAACTAGAGT TCTTATTTTA
GGTGGAACTG GTATGTTGGG GCATACTCTG TTTTCACAGT TAATGTTAGA ACCTAATCTG
GATGTTTACG CAACTGCTAG AAGTTCCGAA GGTTTGAAGG AATGGTTCCC CGCTGATATG
GTTAGTAAAA TTCGTATTGG TGTTGATGCT GACAATTTCG ATACTGTAAT AAGGGCATTG
GCGTCAATTC AACCTGATGT AGTCATTAAC TGTATCGGTC TCATTAAACA GTTGCCCATC
TCCAGTGATC CTTTATCTGC TATAACAGTT AATTCTCTTC TCCCCCATAG AATCTCTTTG
GTATGCCGGA CTGCCGGGGC CAGGTTGATA CATATCAGTA CTGATTGTGT TTTCAATGGC
AGCAAGGGTA ACTATACCGA GCAGGATCCC TCAGATGCTC AGGATTTATA CGGTCGTTCC
AAGTTTTTAG GAGAGGTTTC GTATCCTCAT TGTGTGACCA TACGGACTTC TATAATAGGC
CATGAACTAA AGGGGAAACT TGGCTTAATT GAATGGTTTT TAGCCCAGGA AGGCTCAATA
CGTGGTTTTA CAAAGGCCAT TTATTCTGGT TTTCCTACAG TTGAGCTGGC TCGTATTATT
CGTGAGGTAG TTTTACCCAA TAAGGAATTG TCCGGGGTTT ATCATGTTTC ATCTGAGCCG
ATATCAAAGT ATGATTTATT AAATCTGGTA GCAACAAAAT ACGGTAAGAA AATTGTTATT
GAACCTTATC ACGACTTTGT CCAGGATCGG TCATTAAATT CAGATCGCTT CCGACAGGCC
ACCGGTTATC AACCTCCCTC CTGGGAGGAA ATGGCTGATA AAATGTACAA GGAGTATTCT
AAATCATGA
|
|---|
| Protein sequence | MCRKHISGEE KLMKTRVLIL GGTGMLGHTL FSQLMLEPNL DVYATARSSE GLKEWFPADM
VSKIRIGVDA DNFDTVIRAL ASIQPDVVIN CIGLIKQLPI SSDPLSAITV NSLLPHRISL
VCRTAGARLI HISTDCVFNG SKGNYTEQDP SDAQDLYGRS KFLGEVSYPH CVTIRTSIIG
HELKGKLGLI EWFLAQEGSI RGFTKAIYSG FPTVELARII REVVLPNKEL SGVYHVSSEP
ISKYDLLNLV ATKYGKKIVI EPYHDFVQDR SLNSDRFRQA TGYQPPSWEE MADKMYKEYS
KS
|
|---|
| |