| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0710 |
|---|
| Symbol | |
|---|
| ID | 4283411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 810557 |
|---|
| End bp | 811570 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638137584 |
|---|
| Product | NAD dependent epimerase/dehydratase family protein |
|---|
| Protein accession | YP_753405 |
|---|
| Protein GI | 114566251 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTA AAGGCAAACG GTTTCTGGTG ATAGGCGGAG CGGGACTAAT AGGCTCCCAT
ACCGTAGACG AACTTTGTAA GGAAGATGTA GGGGAAATAA TAATATATGA TAACTTCAGC
CGGGGCAGAA TCGAGAATTC AACTAATGCC ATGAGAGACC CTCGGGTTAA GATATTTGAC
CTGGGCGGAG AACTCCTGCA TAGAGATATA CTTGATATGG CTATGAAGAA CATTGATGGA
GTATTTCATT TCGCTGCCCT CTGGTTGCTC CACTGTTACG ACTACCCCCG TTCCGCTTTT
GAAGTAAATA TTGGTGGAAC CTTCAATGTC TTGGAAGCCT GTATCAATAA CGGAGTAAAA
CGCCTGGTCT ATTCCTCTTC CGCATCCGTT TACGGAGATG CCGTAGAAGA ACCCATGACC
GAAGACCACC CCTATAATAA CAACAATTTC TATGGGGCCA CCAAAATTGC CGGAGAGCAT
ATGGCCAGAG CCTTATACCA CAGATACAAG GGAGAAAGTA ATTTTAATTA TGTAGGTCTT
CGTTATATGA ATGTATATGG CCCCCGTCAG GATTATCGCG GTACCTATGT AGCAGTAATA
ATGAAAATAT TGGATCGTCT CGACAAAGGG CTGCCGCCGG TGGTTTTCGG TGACGGTTCC
CAGGCATATG ATTTTGTTTA TGTCGGTGAT TGTGCCCGCG CCAATGTTTG CGCTATGAAA
GCTGACAGCA CCGATAGCTT CTATAATGTA GGTACCGGTA TACGCACTAC TATCAAAGAA
TTAGCGGAAC TGGTATTGGA AATAACCGGA TCAGACCAGA AAATCAAGTA CGAACCCCAG
GGACTTACCT TTGTAAAAAA CCGTATCGGT TCACCGGTAA AAGCTGAACA GGAAATAAAT
TTTAAGGCGC AGATGCCTCT GCGCGAAGGC CTCATAAAGC TCATCGAATG GCGCAATGCC
CATAAGGCAG AGGTAGAACA GCGCAGGAAA GAAGCAGGGG TTAGCGATGA ATAA
|
|---|
| Protein sequence | MDIKGKRFLV IGGAGLIGSH TVDELCKEDV GEIIIYDNFS RGRIENSTNA MRDPRVKIFD
LGGELLHRDI LDMAMKNIDG VFHFAALWLL HCYDYPRSAF EVNIGGTFNV LEACINNGVK
RLVYSSSASV YGDAVEEPMT EDHPYNNNNF YGATKIAGEH MARALYHRYK GESNFNYVGL
RYMNVYGPRQ DYRGTYVAVI MKILDRLDKG LPPVVFGDGS QAYDFVYVGD CARANVCAMK
ADSTDSFYNV GTGIRTTIKE LAELVLEITG SDQKIKYEPQ GLTFVKNRIG SPVKAEQEIN
FKAQMPLREG LIKLIEWRNA HKAEVEQRRK EAGVSDE
|
|---|
| |