Gene Swol_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0707 
Symbol 
ID4283408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp806668 
End bp807639 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content35% 
IMG OID638137581 
Productnucleotide sugar epimerase 
Protein accessionYP_753402 
Protein GI114566248 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.15214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCG TAATAGTAAC TGGTGCTGCA GGGTTCATCG GTAGTAAGGT ATCTAAAGAA 
CTACTAAAAC AGGGTTATAC CGTTATCGGG ATAGATAATC TAAATGACTA TTATGATGTA
CAGATCAAGT ATTGGCGCCT TGCCACCCTA AAAGAAGAAA ACAAATTTGT ACTTTATACA
GCAGATGTAG AAAACATTGA AGCTATAAGA TTTATATTTA AGTTTCATCA ACCGGACGCC
GTTATTAATC TTGCTGCACG AGCAGGTGTA AGGTATAGTA TGGAAAATCC CCATATATAT
ATGACGACCA ATGCTCATGG GACATTAAAT CTTCTAGAAC TCTGTAAGGA ATTTGGAGTA
AGGAAGTTTG TATTAGCATC TACCTCTTCT TTATATGCAG GACAAGAAAT GCCGTTTAAA
GAAGAATTAC CTGTAAATAC TCCTATTTCT CCATATGCAG CATCTAAGAA AGCAGCAGAA
ATGATGGCAT ATACCTACCA TTATTTATAT GGACTTGATA TAACTGTTTT TAGATATTTT
ACAGTTTATG GTCCAGCAGG ACGTCCAGAT ATGAGTATTT TTCGTTTTAT AAAGTGGATC
ATGGAAGGAA CTCCTTTGCA GGTTTTCGGT GATGGTAGTC AACGTAGGGA TTTTACTTAT
GTGGATGATA TTGCCCGGGG GACTGTTTTA GGATTAAAGC CTATGGGATA TGAAATTATT
AATTTGGGTA ATAGTAATCC AGATACGTTA TCCAAGACTA TAGAGTTAAT TGAAGAGTAC
ACTGGAAAAA AAACTGAAAT TCAATATAAA GAGTTTCATA AGGCTGATAT TTCAGCTACA
TGGGCAAACA TAAGTAAAGC ACAAAATTTA TTAGGATGGC AAGCAAAGAC TAACTTACCG
GAAGGAATAA AGAGAACAGT TCAGTGGATG AAAGATAATT GGGAGTGGAT CCAAAGTATA
AAACTATTAT GA
 
Protein sequence
MKTVIVTGAA GFIGSKVSKE LLKQGYTVIG IDNLNDYYDV QIKYWRLATL KEENKFVLYT 
ADVENIEAIR FIFKFHQPDA VINLAARAGV RYSMENPHIY MTTNAHGTLN LLELCKEFGV
RKFVLASTSS LYAGQEMPFK EELPVNTPIS PYAASKKAAE MMAYTYHYLY GLDITVFRYF
TVYGPAGRPD MSIFRFIKWI MEGTPLQVFG DGSQRRDFTY VDDIARGTVL GLKPMGYEII
NLGNSNPDTL SKTIELIEEY TGKKTEIQYK EFHKADISAT WANISKAQNL LGWQAKTNLP
EGIKRTVQWM KDNWEWIQSI KLL