Gene Swol_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0641 
Symbol 
ID4281499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp733279 
End bp733908 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content53% 
IMG OID638137518 
Productthiamine-phosphate diphosphorylase 
Protein accessionYP_753339 
Protein GI114566185 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0370584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAACT CGGATTATTC CCTGTATCTG GTCACCGACC GCAGCCTGCT TCAGGGCCGG 
AGCCTTCTGG AGGAGGTAAG GAAGGCGGTA AAGGGCGGTG TAAGCATGGT CCAATTACGG 
GAAAAAGAGG CCGGCAGCAG AGAATTCTAT GAACTGGCCC AGACTCTCCA AACGGAATTA 
AGAGAGTTGG GTGTACCCTT GCTCATTAAT GACCGCCTGG ACATTGCTCT GGCGGTTGAT 
GCCGATGGCT TGCACCTGGG GCAGGATGAC CTGCCTTTAC CGGTAGCCCG CTCTCTCTTG 
GGAAAAGAAA AAATAATCGG CCTGTCCATT AATAAGCGGG AAGAGGCCCG GGAAGGAGAG 
AAGATGGGAG CCGACTACCT GGGGGTGTCA CCGGTGTTTT CCACCCCGAC CAAAGCTGAT 
GCTCCCCCGG CCACCGGTTT GGAGTTCCTG GCGAGCTTAA GACAGGAAAT CAAGATACCT 
CTGGTAGCTA TCGGCGGAAT AAATAAGGAA AACCTGAAGA TGATAAAAGA AACGGGAGCC 
GATGGCGCGG CCGTAATATC GGCTCTTATG GGAGCAAGTG ATATTGAGGG GGAAGCCAGG 
AAACTGAGGC AAATATGGGA GAGAAATTAA
 
Protein sequence
MVNSDYSLYL VTDRSLLQGR SLLEEVRKAV KGGVSMVQLR EKEAGSREFY ELAQTLQTEL 
RELGVPLLIN DRLDIALAVD ADGLHLGQDD LPLPVARSLL GKEKIIGLSI NKREEAREGE 
KMGADYLGVS PVFSTPTKAD APPATGLEFL ASLRQEIKIP LVAIGGINKE NLKMIKETGA 
DGAAVISALM GASDIEGEAR KLRQIWERN