| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0639 |
|---|
| Symbol | |
|---|
| ID | 4281497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 731613 |
|---|
| End bp | 732485 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638137516 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_753337 |
|---|
| Protein GI | 114566183 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.784703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGCAAGA TTCTAACTAT AGCGGGCTCT GATTCCTGTG CCGGGGCAGG AATTCAAGCG
GACATCAAAA CTATTCAAGC CCTGGGAGCT TATGCTCTGT CGGTGATTAC GGCAGTAACC
GCCCAGAATA CCCGACAAGT AACGGCTGTT CGGGAAATCG AAGCCCTGGT GATAGAAAAA
CAGCTGGAAG CCATTTTTTC GGATATTCGC CTGGATGGAA TCAAAATCGG CATGTTGGGA
AGGGCCGGAA CTGTTCAGGC GGTAAGCAAT TTTTTGGCAT CTTTCTTCCA GGCGGGAGCT
TTCTGGGAAA AACAACTGAA GAACTCCCTT CCTCTGGTGG TTGACCCGGT GATGATTGCC
AAGAGCGGTG ACCGCCTGCT GGAGGAGGAA GCGGTGGAAT CACTAAAAAA GAACCTCCTG
CCTCTGGCCA GCGTAATCAC CCCTAATCTT ATGGAAGCCG GGGCCTTGTT GGGACGGGAG
ATTAGCAGCT TGGAAGAGAT GAAAGAGGCC GCACGGGAAC TCCTGGAATT CGGCTGCCAG
TGGGCCATAG TCAAGGGTGG CCATCTGAAG GGAGAACCAG TAGATGTCCT GGCCAATAAA
GACTCGCTTT ATTTGCTAAG AGGCCAGCGG GTTGATACTA ATTGCAATCA TGGCACCGGT
TGCACCTTTT CTGCTGCTCT AGCCACCTTG ATGGGACAAG GTTTGGCAGT ACCGGCAGCA
GCCAAACGAG CCAAAGCTTA TGTAGAATAT TGTCTGGAGC ATGGGTTTGC CATAGGCGAA
GGGGTGGGCA TACCTCATCA TTTTGCCGCT CAGCGTCCCT GGAAACCGGA AGCCCTGAAG
GACGGCAGTG ATGCTGCGAA GGAGGAGTTT TAA
|
|---|
| Protein sequence | MRKILTIAGS DSCAGAGIQA DIKTIQALGA YALSVITAVT AQNTRQVTAV REIEALVIEK
QLEAIFSDIR LDGIKIGMLG RAGTVQAVSN FLASFFQAGA FWEKQLKNSL PLVVDPVMIA
KSGDRLLEEE AVESLKKNLL PLASVITPNL MEAGALLGRE ISSLEEMKEA ARELLEFGCQ
WAIVKGGHLK GEPVDVLANK DSLYLLRGQR VDTNCNHGTG CTFSAALATL MGQGLAVPAA
AKRAKAYVEY CLEHGFAIGE GVGIPHHFAA QRPWKPEALK DGSDAAKEEF
|
|---|
| |