| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0601 |
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| Symbol | |
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| ID | 4282448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 692845 |
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| End bp | 697173 |
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| Gene Length | 4329 bp |
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| Protein Length | 1442 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638137480 |
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| Product | Signal transduction histidine kinase-like protein |
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| Protein accession | YP_753301 |
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| Protein GI | 114566147 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACG GTTTCAGTTT AAACGAGGTG AAAGCTAGTT TTGATACTTT ATTTAATACC
ATAGAGGATT ATCTTTTTAT TATAAATGAA AATGGCAATG CTGTATATGC CAATAGGGCA
GCTATAGAAA AACTGGGGTA TAGCCAGGAA GAAATACAGG GGTTGAGTCT ACTTCTTTTG
CAGCCACCGG AAAGACGAGA CGAAGCCGCA CAGATATTTG CAAGTATGAT GGCAGGTCAG
CGCGATCATT GTCCTATTCC TCTTTATACT AAAGATGGCA GCTACATACC GGTAGAAACC
AGCGTTGTGA GGGGGCAGTG GCAGGGGACC CCCGTCTTTT TTGCTATCAG TAAAGATATA
TCACAGATAA GCCAGGCTAA CGCCAGGTTT TCCAAAGCCT TTTCTATTAA TCCGGCGCTT
ATGGCTATTA GCAAGATTGA CAGTGGTAAG TATATTGATG TAAACGAAGC TTTTCTTAGT
AGGTTGGAAT ATAATCGGGA CGAGGTAATC GGCAAAACCT CAGGTGAGCT AGGGATTATA
CCGTTTGCAG AAAGAGATTT GCTAATAAAA GAACTTTATC AGCAGGGTTG TATACGTGAT
AAGGAATTAA CCCTTATTAC TAAAAGCGGT AGCGAATTGT ATGTTATCTT TTCGGTCGAT
TTTATCGAAA CCGACGATCA GACCTACCTT CTAACCGTAA TGGTGGATAT CACCGGAAGG
AAGATAGCCG AAGAACTTTT AAAGGAAAGT GAAGATCGCT GGTCTTCAGC CCTGGAGTGC
AGCGGGAACG GGGTTTGGGA TTGGGATGCG GTAACTAATC GGGTATTCTT TTCCAAGGAA
TGGAAAAGCA TGTTAGGTTA CGAAGAACAT GAAGTTGGTG ACTCCCTGCA GGAATGGGAA
AGCCGGGTTC ACCCGGAGGA TTGGGAACGG ATCCAGGTAG AACTGCAAAA ACACTTTGAT
GGCCAGACAC CAGTTTACGG GAGTGAGCAT CGCCTGCGTA CCCGAGATGG CAGCTACAAA
TGGCTTCTGG ATCGGGGGAA GGTAATTAAC CGTGATGAAG AAGGCAAAGT TCTGCGGGTT
ATTGGCACCC ATACCGACAT CACCGAGATA AAGAAAGTTC AGGAAGACTT GAGCCGAACC
CGGGGACAGT TAAAAGCCAT TTTGGATAAC CTGCCTTTTT TAGCCTGGTT TAAAGATAAA
GAAGGACATC ATATAGAAGT AAACCGGTTT TTTGAAATAT CCTGCGGCTT AACACGTGAC
GAAATAATTG GTAAAACCGA CCTGGATATA TGGCCCCGGG AATTGGCTCT AGTATACATG
GAAGATGATC GGGAAGTGAT GGCTAGCAAA AAACAAATCA ACAAAGTCGA GCGGGTACAG
GATAAAGCCG GAGGTATATG GTTTAATACC TTCAAAACCC CAGTGTTTGA CCAGGAGGGC
AATGTAATAG GAACTGCGGG AATTACCCGG GATATTACCG AGAGTAGAAG ATTAGAACAT
GAGCTGATAG AGCAGCGGAC CTTCTTAAAA TCACTGATTG ATGCCATTCC CGACCTTATA
TTTTACAAAG ATATAAACAG TTTATACCTG GGTTGTAACC ATGCCTTTGC GCATAGGTTT
ATTGGACTAT CCGAAGAAGA GATAGTGGGC AGAACTGATT TGGATTTTGT TAAGGATCAG
GAGACAGCCC GCTTTTTTAT ACAAAAAGAC AGGGAAATAC TGCTGTCGGG TGAGACCCGT
ATGAACGAAG AAACTATAAC CCTGGCTGAT GGCTCCATAA TGGAATTAGA GACGGTAAAA
ACGCCTTTTT TTAAAGGCGG AACCGTAGCC GGGTTGATTG GAGTGTCCCG GGATATCACC
AAGCGTAAAA TAGCCCAAAA CCAACTGCTT ATAAAACAAA AAATACTATC CAACATTGCT
TCCGCTACCA ATGAACTATT AATAAATAGT GATTACTATG AAGCTATTAA TAAATGCCTG
GCTTTGCTGG GTGAGGCTAC CGGAGTAGAT CGGGTCTATA TGTTTAAAAA CCATTATGCA
GATAATAAGG CCTATACCAG CTACAGAATG GGATGGAACT CCGGTGTATT TCCGGCACAA
ATTAATAATC CCAAGCTGCA AAACATTCCC TTCGATCAAG CGCAAAATTT TATAGAACCA
TTGATGCGAA ATGAAGCCGT CAAGGCACAG GTACGAGATT TTGGAGAAGG ATGGATTAAA
GAAACCCTGT TAGAACAGAG TATCTTGTCA ATACTGGTTT TACCCATCTT TGTAGGCGGA
GTTTTCTGGG GTTATGTTGG TTTTGATGAA TGCAAGGAGG AAAGAAACTG GAGTGAAGAC
GAGTTTTCCA TTTTGAAGGC TTTCAGCAAT TCTATCGCTG AAGCCATCGA GCGCAGTCAG
ATGGAACAAA AACTGGCCCA GGCTAAAGAG ATAGCTGAAT CTGCCAACTA CGCCAAGTCC
TTATTTTTAG CTAATATGTC CCATGAGATT CGCACTCCTA TGAACGGCAT ACTGGGATTC
CTGGAACTCC TGGGGGAAAC TGAACTTTCG ACTGAACAGC AGGATTATGT ACAGGAGGCA
CATAGAGCCT CGGAAATCCT ACTTTATCTC ATTAATGATA TCCTGGATTT CTCTAAAATT
GAAGCTGGTA AACTGGCCAT GGAAGAAATC CCCTTCCGGG TTAGAACGGT AGTGGAAGAT
GCTGTTTCCC TGCAGGCTCC AAAGGCTAGA GAAAAAGGTC TGGAGATGCA TACCCTAATC
AAATCCAATG TACCGGATGA GGTAGTAGGT GACCCGGCCC GGCTGCGTCA AATCTTAAAT
AACCTGCTTA GCAATGCGGT TAAGTTCACC CATACCGGTG AAATTCTGGT AATTGTGGAA
ACGATAAATG AAAGCTCAGA TAAGGCGGAA ATCGCTTTTG AAGTTAGTGA TAGCGGTATT
GGTATTGCCC CGGAGGACAT GGAAAAACTT TTTCAACCCT TTACCCAGGC AGATGCCTCC
ACCACCAGGA AATACGGAGG TACCGGTCTG GGCCTGGCGA TTTCCTATGA ATTGGTTCGC
TTAATGGAAG GAACCATGCA GGTAAAAAGT AAATTAGGCC AGGGGTCAAA GTTTTATTTC
ACTGCTTGCT TTAAACCAGG TCTGCGTAAG GATACCCTGC CTTTTGAACC TGCAGAGCTT
AAGGGTGCCC GGGTACTAAT AGTGGATGAT AATAGCAGCA ACCGCAAAAT CATACGAACT
TATCTAGAAG ATGCCCAATG CCTGGTTGAG GAGAGCGATA GTGCCGAAAA GGCCATCACT
ATCCTTCTAT CCGCATCCGC TGTAAAATCC TTTGATGTAG TAATCGTAGA TTTTCAAATG
CCTGCGATGA ATGGTCATGA GTTAGCCGCT GCCCTTAAGG CCATACCTTC CACCCGAGCT
ATACATTTGA TTATGCTTAC TTCGGCAGCC CAGAAGGGAG ATGCCCGCCG GGCCAAAGAA
CATGGTTTTA GCGGCTACCT GACTAAGCCC GTGAAAAGAG ACGAACTGCT CCAATGCATT
TCTATAGTCC TTGGTTTAAA GACAGAAGCC TCACTGGGTG ATTCAATCGT TACCCGTTAT
ACGATCAAGG AAAACCCGAT TCCTGCCCGG CCCAGGTTTC TTCTGGTCGA AGATAATGAA
ATGAATCAGA AAATAATTGT TAAAATGTTA GAAAAGAGAG GTATGTACTG TGATCTGGCC
TGCAGTGGAG CCGAAGCTTT AAAAGCCCTG CAGCAAAAAG ATTATGACAT AGTATTTATG
GACTGTCAGA TGCCGGAGAT GGACGGATAT GAAACTACTG CTAGAATTAG ACAAATGGAG
GGAGAAGAAC GACATACTAT CATTGTTGCT ATGACTGCCA ACGCTATGGA GGGAGACCGG
GAGAAATGTT TGCAGGCAGG CATGGACGAT TACATCAGTA AACCAGTTGA TTTCCAACTA
CTATTTAATA TTATTGAACA GTACACGGCT AGGCAGCAAG AGTCTGTTAG CGAGGTCGCG
GCCATGCTGG AGGAAAACTT GAGCAGCTTT ATAGCTGAGA CCGGATTATC TAAGGGAGAG
GGACGGGAGC TTTATGATAA ATTATGGTCA ACCCTGCCAG GGGTATTGGA AGAATTGCAA
AATGCCCTGG CCAACAGCGA CTTTAAAAAA ATTCGCAGCC TGGCTCATCA ATTAAAAGGT
TCTTCCGGTA CCCTGCGTAT ACAAAAGCTT TATGAACTTT TTTTTGATCT GGAACAGAAA
GCAATTGCGG AGGCTAAAGC AGCATGTGTT GACACCCTGC AATTAATCCA CCGCCTGGTC
AAGAGCTAA
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| Protein sequence | MTDGFSLNEV KASFDTLFNT IEDYLFIINE NGNAVYANRA AIEKLGYSQE EIQGLSLLLL
QPPERRDEAA QIFASMMAGQ RDHCPIPLYT KDGSYIPVET SVVRGQWQGT PVFFAISKDI
SQISQANARF SKAFSINPAL MAISKIDSGK YIDVNEAFLS RLEYNRDEVI GKTSGELGII
PFAERDLLIK ELYQQGCIRD KELTLITKSG SELYVIFSVD FIETDDQTYL LTVMVDITGR
KIAEELLKES EDRWSSALEC SGNGVWDWDA VTNRVFFSKE WKSMLGYEEH EVGDSLQEWE
SRVHPEDWER IQVELQKHFD GQTPVYGSEH RLRTRDGSYK WLLDRGKVIN RDEEGKVLRV
IGTHTDITEI KKVQEDLSRT RGQLKAILDN LPFLAWFKDK EGHHIEVNRF FEISCGLTRD
EIIGKTDLDI WPRELALVYM EDDREVMASK KQINKVERVQ DKAGGIWFNT FKTPVFDQEG
NVIGTAGITR DITESRRLEH ELIEQRTFLK SLIDAIPDLI FYKDINSLYL GCNHAFAHRF
IGLSEEEIVG RTDLDFVKDQ ETARFFIQKD REILLSGETR MNEETITLAD GSIMELETVK
TPFFKGGTVA GLIGVSRDIT KRKIAQNQLL IKQKILSNIA SATNELLINS DYYEAINKCL
ALLGEATGVD RVYMFKNHYA DNKAYTSYRM GWNSGVFPAQ INNPKLQNIP FDQAQNFIEP
LMRNEAVKAQ VRDFGEGWIK ETLLEQSILS ILVLPIFVGG VFWGYVGFDE CKEERNWSED
EFSILKAFSN SIAEAIERSQ MEQKLAQAKE IAESANYAKS LFLANMSHEI RTPMNGILGF
LELLGETELS TEQQDYVQEA HRASEILLYL INDILDFSKI EAGKLAMEEI PFRVRTVVED
AVSLQAPKAR EKGLEMHTLI KSNVPDEVVG DPARLRQILN NLLSNAVKFT HTGEILVIVE
TINESSDKAE IAFEVSDSGI GIAPEDMEKL FQPFTQADAS TTRKYGGTGL GLAISYELVR
LMEGTMQVKS KLGQGSKFYF TACFKPGLRK DTLPFEPAEL KGARVLIVDD NSSNRKIIRT
YLEDAQCLVE ESDSAEKAIT ILLSASAVKS FDVVIVDFQM PAMNGHELAA ALKAIPSTRA
IHLIMLTSAA QKGDARRAKE HGFSGYLTKP VKRDELLQCI SIVLGLKTEA SLGDSIVTRY
TIKENPIPAR PRFLLVEDNE MNQKIIVKML EKRGMYCDLA CSGAEALKAL QQKDYDIVFM
DCQMPEMDGY ETTARIRQME GEERHTIIVA MTANAMEGDR EKCLQAGMDD YISKPVDFQL
LFNIIEQYTA RQQESVSEVA AMLEENLSSF IAETGLSKGE GRELYDKLWS TLPGVLEELQ
NALANSDFKK IRSLAHQLKG SSGTLRIQKL YELFFDLEQK AIAEAKAACV DTLQLIHRLV
KS
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