Gene Swol_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0587 
Symbol 
ID4282684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp677001 
End bp678683 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content48% 
IMG OID638137466 
ProductDNA repair and genetic recombination protein 
Protein accessionYP_753287 
Protein GI114566133 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAAG AGATATACAT AAAAAACTTC GTACTTATCG AAGAACTGCG GCTTTCTTTT 
GAGCAGGGCT TGAATGTACT TACCGGCGAA ACCGGAGCAG GTAAATCCAT TATAATTGAT
GCCCTGGGCC TGGTTCTGGG TGAACGGGTA AGAAACGATC TCCTGCGGGA CAGCCAGAAA
AAGGCCATAG TTGAAGCAGT ATTTGTCGTG GAGAATAATA GTGCAGCCCA TTCAGTACTG
CTGGAAAACG GACTACTGGA GGAAGAAGAG GATTGCATAG TAGTAAGCCG CGAAATCGCT
ACCAGCGGGC GTAGTTTGGC GCGCATAAAC GGGCGTAATG TAAATGCCGG TTTCCTCAAA
AGCCTGGCCC GGCATCTGAT AGATATGCAT CTGCAGGATG AAAGCAGCGG ATTTTTAAAC
CCGCAAAACT ACCTGCAATT CGTAGATGGT TTTATCGAGG AAGGCCAGGA TATAGGGAAA
GAGATTGAAA GCCTCTTCCT GCAGATAAGA GAGGAAGAAC GGCAGCTGGA AAACTACAAG
AACAACGAAC AGAATCGTTT GCAGAAGATT GATTTTATCC GCTACCAAAT AGAGGAAATA
GAAAAAGCCG GCTTGCGCAG CGGAGAAGAA GAGGAACTTC TGGCTCTTAA CCAAAGAATA
AAGAATGCTC AAGCTCTGGA GGAAGGAACC GGGAGGATAT TGGAACAGCT CTACCATCGC
CAGCATGCTG GTGAAAGTGC CCTGGATTTA ATTTCGGCGA GCCTGGAGAA CCTGGGTCGC
CTGAAAGAGG ATGAATTTTT ATCCCGCTTA CAATCTCCGC TGGAAGAGAT TTATTATTCC
CTGCAGGATA TTGCCTCTCA GCTCTCATCA TTTCGGGATT CCCTGGATTT CGAACCAGGC
CTGTTGGAGG AAAGTGAGGA ACGACTATAC CAGCTGCAGA GGCTTAAAGG CAAATATGGT
CAGAGTATTG ATGAAATCCT GGATTATCTG GGAAAGGCTC GCCTGGAATT GGAATATCTG
GAGAACAGCG GAGAAAAACA GGAAGAGCTG GAAGAATCCA TAACCGCATT AAAGTTAAGA
TACCATCACC TGGCAGCTCA ACTGAGCCAA TTGAGGCAAA GTGCCGCGCA AAAGCTGCAG
GAAAATGTAG ATATGGAACT AAGGGAGCTT AACATGCCCC AGGTGAAATT TGCCGTTCAT
ATGGAGCTTC GGGAAACGCC AGGCATTAAA GGCATGGATC AGGTAGATTT CCTGTTTTCC
CCCAATCCCG GGGAGGAGAT GCATTCTTTA TCCCGGATTG CTTCGGGAGG AGAGAGGTCT
CGTTTTATCC TGGCCTTAAA AAAGGCCTTG GCCGGGATAT ATTTGATACC CACCCTGATT
TTTGATGAAA TTGATGTAGG GGTGGGCGGA ACAGCATTGG TAGCCATGGC CAATAAACTA
TATGAATTAT CCCTGGAGCA TCAGCTTATA CTGGTAACCC ATTCCCCTCA GATAGCCAGT
TTGGCTCACC AGCATTTCCT TATTGAAAAA GCCAGCAGTG AAGAATGCAC CCTTACTACA
GTGAGGGGAT TGGCGGCCGA GGCTCGGGTA GAAGAGATTG CCCGTATGCT GGAGGGAGAA
GATTTTTCCC CATTGGCCCG GGAGCATGCC CGCGAAATGC TCACCCGGAG AGATCTGACA
TAA
 
Protein sequence
MLQEIYIKNF VLIEELRLSF EQGLNVLTGE TGAGKSIIID ALGLVLGERV RNDLLRDSQK 
KAIVEAVFVV ENNSAAHSVL LENGLLEEEE DCIVVSREIA TSGRSLARIN GRNVNAGFLK
SLARHLIDMH LQDESSGFLN PQNYLQFVDG FIEEGQDIGK EIESLFLQIR EEERQLENYK
NNEQNRLQKI DFIRYQIEEI EKAGLRSGEE EELLALNQRI KNAQALEEGT GRILEQLYHR
QHAGESALDL ISASLENLGR LKEDEFLSRL QSPLEEIYYS LQDIASQLSS FRDSLDFEPG
LLEESEERLY QLQRLKGKYG QSIDEILDYL GKARLELEYL ENSGEKQEEL EESITALKLR
YHHLAAQLSQ LRQSAAQKLQ ENVDMELREL NMPQVKFAVH MELRETPGIK GMDQVDFLFS
PNPGEEMHSL SRIASGGERS RFILALKKAL AGIYLIPTLI FDEIDVGVGG TALVAMANKL
YELSLEHQLI LVTHSPQIAS LAHQHFLIEK ASSEECTLTT VRGLAAEARV EEIARMLEGE
DFSPLAREHA REMLTRRDLT