| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0559 |
|---|
| Symbol | |
|---|
| ID | 4281400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 653973 |
|---|
| End bp | 655322 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638137443 |
|---|
| Product | biotin carboxylase |
|---|
| Protein accession | YP_753264 |
|---|
| Protein GI | 114566110 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000152062 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTTCCC GAGTTCTAAT AGCCAATCGT GGAGAAATTG CCCTGCGGAT TATAAGAGCA
TGTAAAGAAC TGGGCATAGA AACCGTTGCC GTATATTCAG TTGCGGATAA AGACAGCCTG
CATGTTAAAC AGGCGGATGA GGCTATCTGT ATCGGCGGAG CCCCGGCCCG GCAAAGCTAT
CTTAATATAT CCAATATAAT TGCCGCTGCT CAGAATAGCG GGGCTGAGGC TATTCATCCC
GGGTATGGCT TTCTGGCGGA GAATTCCCAT TTTGCCAGTT TGTGTTCCAG CTATAATATC
AAGTTCATTG GCCCCCCACC AGAAGTTATT GAACTTATGG GAGATAAAGT GCAAGCTCGG
GAACTGGTAA AAAGTGTGGG AGTTCCAGTT GTGCCTGGAA GTGATGGGGC GGTGCAATCA
TATAAAGAAG CCCTGGCTGT GGCCAGGGAA ATTGGCTATC CGGTTATGAT CAAGGCTTCC
GCAGGGGGCG GCGGCAAGGG TATGCGCCTG GCTCATAATG AAAGCTCCTT GAAAAACGCC
CTGGAGATGG CCCGTATGGA AGCAGGGGCT GCTTTTGGCA ATGATGAAAT ATACCTGGAG
AAATATATCG AAGAGCCCCG TCATATTGAG TTTCAAATCC TGGGAGATCA GTTGGGTAAT
CTAATTCACC TGGGAGAGAG GGATTGTTCC CTGCAAAGGC GCAACCAGAA ACTTTTGGAA
GAGGCCCCTT CCTCTTTACT GGATGAGGCC TTGCGCCAGC AGATGGGGAA AGTTGCGGTT
GATGCCGCCC GGGCAGCAGG CTACTCCAGT GCCGGCACCG TGGAATTTTT AGTGGACAAA
AATAAGAAAT TTTATTTTAT CGAAATGAAT ACCCGTATCC AGGTCGAACA CCCGGTAACA
GAAATGGTTA CGGGAATTGA TATCATCAAG GAACAGTTTC GGATTGCGGC GGGTGAAGAG
CTTTCTTATC AACAGGAGGA TATTGAGATA AGGGGCTGGG CTCTGGAATG CCGGATTAAT
GCCGAAGATC CTGCTTGCAA CTTTCAGCCC TCTCCGGGAC AGGTAGGGCA ATACATCATT
CCGGGAGGAC CAGGGATAAG AGTGGATTCT TCCGTATATT CCGGCTACCA CATACCACCT
TTTTATGATT CCATGGTGGC CAAATTGATT GCTTGGGGCA GGAACAGAGA TGAGGCTATC
CAGCGTATGA AACGAGCCCT GGGAGAGTTT GAAGTGGAGA ATATCAATAC TACCATCCCC
TTTCACCTGG AAGTACTGGA TAATGCCTTT TTCCGCAAAG GTGAAGTTTA CACCAACTTT
ATACAAAGAC GAATGAGCGA TAAAGCCTAA
|
|---|
| Protein sequence | MFSRVLIANR GEIALRIIRA CKELGIETVA VYSVADKDSL HVKQADEAIC IGGAPARQSY
LNISNIIAAA QNSGAEAIHP GYGFLAENSH FASLCSSYNI KFIGPPPEVI ELMGDKVQAR
ELVKSVGVPV VPGSDGAVQS YKEALAVARE IGYPVMIKAS AGGGGKGMRL AHNESSLKNA
LEMARMEAGA AFGNDEIYLE KYIEEPRHIE FQILGDQLGN LIHLGERDCS LQRRNQKLLE
EAPSSLLDEA LRQQMGKVAV DAARAAGYSS AGTVEFLVDK NKKFYFIEMN TRIQVEHPVT
EMVTGIDIIK EQFRIAAGEE LSYQQEDIEI RGWALECRIN AEDPACNFQP SPGQVGQYII
PGGPGIRVDS SVYSGYHIPP FYDSMVAKLI AWGRNRDEAI QRMKRALGEF EVENINTTIP
FHLEVLDNAF FRKGEVYTNF IQRRMSDKA
|
|---|
| |