Gene Swol_0558 details

Gene Information

• Locus tag: Swol_0558
• ID: 4281399
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophomonas wolfei subsp. wolfei str. Goettingen
• Kingdom: Bacteria
• Replicon accession: NC_008346
• Strand: +
• Start bp: 652052
• End bp: 653962
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 638137442
• Product: pyruvate carboxylase subunit B
• Protein accession: YP_753263
• Protein GI: 114566109
• COG category: [C] Energy production and conversion; [I] Lipid transport and metabolism
• COG ID: [COG0511] Biotin carboxyl carrier protein; [COG5016] Pyruvate/oxaloacetate carboxyltransferase
• TIGRFAM ID: [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein; [TIGR01108] oxaloacetate decarboxylase alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0745803
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTGG GCAAAATCAA GATAACTGAT ACCAGTTTGC GAGACGGACA TCAAAGTTTG 
TGGGCCACCC GTATGACTAC AGAAGATATG CTTCCCATCC TGGAAAACAT TGACGAGGTG 
GGTTATCATT CCCTGGAAGT ATGGGGAGGC GCTACCTTTG ATGTATGTAT TCGCTACCTT 
AATGAAGACC CCTGGGAAAG GTTGCGTAAA ATCCGCCGCG GAATAAAAAA GACCAAATTG 
CAAATGCTGC TCAGAGGTCA ATCAATTGTA GGTTATACCC ATTATCCGGA TGACATTGTC 
GAGAAGTTTG TGGAAAAGGC GGCGGAGAAT GGTATTGACA TATTCCGCGT ATTTGATGCC 
TTAAACGATA TCCGGAATCT GGAAACCTGC ATGAGGGCCG CCAAAAAAAG CGGCAAACAT 
GTGCAGGCCT GTGTAGTCTA TACTGTAAGC CCGGTTCATA CCATGCAGCA TTTTGTAGAG 
ACGGCTCTGC GGCTGAAGGA TATGGGGGCG GATTCCATAT GTATTAAGGA TATGGCCGGT 
TTATTATCGC CTTATGCCTC CTTTGAGCTG GTTAAGGCCC TAAAGGATAA TGTCCAGCTG 
CCCCTGCAAT TGCATACTCA CTATATAGGT GGACTGGCTA TTGCGGCTCT TTTAAAAGCA 
GCGGAAGCCG GGGTGGATAT CATTGATACC GCCAGCGTAC CTATGGCCTT TGGTTCTTCC 
CAACCGCCGG TGGAGACCAT TGTGAGAGCC CTGCAGGATA CTCCCTGGGA TACCGGCTTA 
GATCTTCATG CCTTGTTTAA TATTGCTACT CATTTTGAGC AGATACGCAA ACACAAGGGC 
TTTGAGCGGG GAGTAACGCG TATTGCCGAT ATGAAAGTTT TTGAACACCA GGTGCCTGGA 
GGCATGATTA CCAACCTCTA CTCGCAATTG GAAGAACAGA AGGCTTCCCA CCGCATTGAC 
GAGGTGCTGG CGGAAATACC AAGGGTGAGA GCAGATTTGG GCTATCCCCC GTTGGTTACG 
CCTACCAGCC AGATAATTGG GATTCAAGCG GTGCTGAATA TATTAATGGG AGAAAGATAT 
AAGCTCTGCC CCGGTGAGGT AAAGGACTAT GTCCGGGGCT ATTACGGTAA ACCGGCGGTA 
GCAATTAAGG ACGAGATCCG GAAAAAGATA ATTGGCGACG AAGAGGTCAT TACCGTCCGG 
CCTGCTGATT TGCTGGAGCC GGCCTGGGAG AGATCTCGCC AGGAGCTGGG TGAACTGGCG 
GAGAGTGAGG AGGATATACT TACTTATGCT TTGTTCCCCC AAGTTGCCTT AAAATTTTTC 
GAATATAGAA AAAACAGGGG GGCCGAAGAT ATTCCCCAGA TTTCTTCCAT AGATACTCTG 
GGGGAAGAAC TGCTTGATGA AGAAGCCCCG GTAGCAATAC CGCCGGTGGT TTCGCGAGTT 
AAGAAGGTTG CAGCTCATGG GGGAGATGAT GAAATGAAAA TCGATGAAAT TAGAGAATTG 
ATACTCTTGA TGGACCAGAG CAGTATCAGT GAACTGGAAG TACAAAAAGA CGCTTATAGA 
CTAAGTTTAC GCAAAGGAAA TGGGCCGGCA ATTGATAAAG CGGCAACTGC TGCACCGATG 
AATTTGCCCC CGGCCCTCTC CAGTGAAGCA GCTAAGCTTG AGCAGGATAA TTTTACGGAG 
ATTTTGGCTC CCATGGTGGG GACTTTCTAT GCGGCACCTT CCCCGGATTC CCCTCCCTAT 
GTGCAGCCGG GAGACCATGT TAGCCCGGGT CAGACCCTGT GCATACTGGA GGCCATGAAG 
TTGATGAATG AGATAAAAAC CGAATTTGCC GGAACCATTA TTGAAATCAT GGTGGACAAC 
GCGGAAGCGG TTGAATATGG TCAAGTCCTG TTCTTAATAG AGAAAGACTA G 

 

Protein sequence

MELGKIKITD TSLRDGHQSL WATRMTTEDM LPILENIDEV GYHSLEVWGG ATFDVCIRYL 
NEDPWERLRK IRRGIKKTKL QMLLRGQSIV GYTHYPDDIV EKFVEKAAEN GIDIFRVFDA 
LNDIRNLETC MRAAKKSGKH VQACVVYTVS PVHTMQHFVE TALRLKDMGA DSICIKDMAG 
LLSPYASFEL VKALKDNVQL PLQLHTHYIG GLAIAALLKA AEAGVDIIDT ASVPMAFGSS 
QPPVETIVRA LQDTPWDTGL DLHALFNIAT HFEQIRKHKG FERGVTRIAD MKVFEHQVPG 
GMITNLYSQL EEQKASHRID EVLAEIPRVR ADLGYPPLVT PTSQIIGIQA VLNILMGERY 
KLCPGEVKDY VRGYYGKPAV AIKDEIRKKI IGDEEVITVR PADLLEPAWE RSRQELGELA 
ESEEDILTYA LFPQVALKFF EYRKNRGAED IPQISSIDTL GEELLDEEAP VAIPPVVSRV 
KKVAAHGGDD EMKIDEIREL ILLMDQSSIS ELEVQKDAYR LSLRKGNGPA IDKAATAAPM 
NLPPALSSEA AKLEQDNFTE ILAPMVGTFY AAPSPDSPPY VQPGDHVSPG QTLCILEAMK 
LMNEIKTEFA GTIIEIMVDN AEAVEYGQVL FLIEKD