| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0539 |
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| Symbol | |
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| ID | 4281268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 636741 |
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| End bp | 637802 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638137423 |
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| Product | Tfp pilus assembly protein ATPase PilM-like protein |
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| Protein accession | YP_753244 |
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| Protein GI | 114566090 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGACTT TGCTAAATGC CAAAAAGTTC AGCAAGCAAT TTAGTAGTAA TGAAGGGGGA
GGTATAGTCA TGCTTTTCCG GGCTACTGGA ATTGGTTTGG ACATAGGTAG CAAGAAAATC
AAGCTGGCCA GGGTAAAGAA AGTCAAAAAA GGCTTGGAAC TAATGGATTT TGCCTCAATG
CCAACACCAA ATGGAGTAAT AGAGTACGGT AAGATTATAG CTCCTGTAGA ACTAGGGAAA
GCAATTTCCT CACTGGTCAA GGAGATGGGC TGGAAAGGTC AAAAGGTTAT ATCGGCCTTA
TCCAATCAAG AAATATTTTT TGATAACTTT ATTTTGCCGC GAATGAATAG GAGGGAAAGC
AGGAAGGCAG CCTTGTACCA GTCCTCTTCA TTCCTCCCTT TTCCCCTGGA TGAAGCAGCC
TTTGATATTT TTTTCTTAAG GGAAATAGAG AACGGCCAAG GCCGTAAAAG GGAAGTGTTT
TTCGCAGCCG CACAAAGCTT GCAGGTGGAG CATTTAAAGA AGGTCTGCAC TCTGGCCGGG
TTACGCCTGA CCGTAGTGGA AATTCCCGCT CTGGCTCTTA ATCGGCTTTG GAATAACAAC
AACGGAAAAG ATTTAACTGT TTTTTTAAAT ATCGGGTATT CATATGCTTG TTTTTCTGTT
TTCCAGCAAG AAAAACTTCT CTTCCAGAGG AGCTTTGTTT CTTTCTTGGA GGGGATGATA
GATATTCTGG GTGATAATAT ATTATTGGAA GAAGTGGATA TTACAGAGAA CCTTCAGCTT
CAAGAGCTTA TGGAGGAATT TTTAGCCAGG GTAAAGCAAA TGCTTAGTCT ATTTCAGCCA
CAAGAAAGAG AAATGATAAT TGCCCGAATT CTTTTGTGTG GTGGAGGAGC AAAGCTTAAG
GGTTTGGCAG GGTATTTAAG TATGGTATTA AATGCTATAG TACCAACGCT CAATCTACCT
GCTACTTTGG CTTTACCCCC CAAGTTCGAG CAGTATAAGC AGGAGTTAAG CTGCGATTTT
TCCGTAGCAA TAGGACTGGC TAGCCGGGGG GTGCTGGGAT GA
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| Protein sequence | METLLNAKKF SKQFSSNEGG GIVMLFRATG IGLDIGSKKI KLARVKKVKK GLELMDFASM
PTPNGVIEYG KIIAPVELGK AISSLVKEMG WKGQKVISAL SNQEIFFDNF ILPRMNRRES
RKAALYQSSS FLPFPLDEAA FDIFFLREIE NGQGRKREVF FAAAQSLQVE HLKKVCTLAG
LRLTVVEIPA LALNRLWNNN NGKDLTVFLN IGYSYACFSV FQQEKLLFQR SFVSFLEGMI
DILGDNILLE EVDITENLQL QELMEEFLAR VKQMLSLFQP QEREMIIARI LLCGGGAKLK
GLAGYLSMVL NAIVPTLNLP ATLALPPKFE QYKQELSCDF SVAIGLASRG VLG
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