| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0524 |
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| Symbol | |
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| ID | 4281253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 623557 |
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| End bp | 624429 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638137408 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_753229 |
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| Protein GI | 114566075 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTTTAG ATATCAAAAC TGAACTTATG GGCTTGATAG GTTATCCCTT GCAGCATAGT
CTTTCTCCCC TGATGCACAA TCTTACCCTT AAAAAGATGG GCTTAAACTG TATTTATCTA
GCACTGGAAA TCGAGGAAGG AAAGCTGCCT GAAATTCCTT CCGCTATCCG CACTCTGAAT
TTTCGAGGAT TGAATGTTAC CATCCCCTAC AAGGAAAAGA TTATCCCCTT TTTGGATGAA
TTATCACCCG AAGCGGCGGC CTTCGGGGCA GTAAATGTGA TAAAGAATAA AAACGGGCAC
CTGCATGGTT ATAATACTGA TGGCCGGGGA TTCGTAGAAG CATTACGGGA AGAAGGAATC
GACCCCGGAG AAAGGGCGTT GTTTATTGGA GCCGGAGGGG CAGCCCGCTC GGTGGCCTTT
GCTCTGGCTG GTCTTGGTGT AAGCCGCCTG GATTTTTTGG ATTTGGATTT CTCCCGGGCC
AGGCAACTGG CAGAGTTCAT AACCAGCCGC AGCTCAAGTT TAGCTTCAGC TTTCCTAATG
AACACGCTTG AATTTCAACG TTTAAGTCGG ACGGCCAGCA TTATCATTAA CTGCTCTCCG
GTGGGGATGT TTCCTGATAC TGGTAAATCG CCGGTAAGTA AAGAGGATCT GCGGGGAAGC
AGGGCCGTCT TGTGCGACCT TATTTATAAC CCGCTGCAAA GCCGTTTTTT ATCTTTGGGG
CAAGAACTGG GGCTTGAAAC CATGAACGGA CTGGGGATGT TCGTTCAGCA AGGAGCTCTG
ACCCTGGAAA TACTGCTGGG GCAAAAGCCT CCCCTGGACT ACATGAAGGA AGTGGTGCAA
AATCAGCTCG AAAAAAGGGT TGACCCTGAT TGA
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| Protein sequence | MPLDIKTELM GLIGYPLQHS LSPLMHNLTL KKMGLNCIYL ALEIEEGKLP EIPSAIRTLN
FRGLNVTIPY KEKIIPFLDE LSPEAAAFGA VNVIKNKNGH LHGYNTDGRG FVEALREEGI
DPGERALFIG AGGAARSVAF ALAGLGVSRL DFLDLDFSRA RQLAEFITSR SSSLASAFLM
NTLEFQRLSR TASIIINCSP VGMFPDTGKS PVSKEDLRGS RAVLCDLIYN PLQSRFLSLG
QELGLETMNG LGMFVQQGAL TLEILLGQKP PLDYMKEVVQ NQLEKRVDPD
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