Gene Swol_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0523 
Symbol 
ID4281252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp622874 
End bp623398 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content48% 
IMG OID638137407 
ProductHAD family phosphatase 
Protein accessionYP_753228 
Protein GI114566074 
COG category[R] General function prediction only 
COG ID[COG2179] Predicted hydrolase of the HAD superfamily 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01668] HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0518959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAT TCCTTTATCC TCAAATCTAT GTTAAATCTC TTTTGGATAT ACCGCTGGAT 
AAACTTAGAG AAATAAAGAT TAACACTTTT ATTTTGGATC TTGATAATAC AATTACCGAG 
TGGAACAGAA GGGAAGTAAG GCAAGAAATA GCGGAATGGT TTGAGAACAT CAAGGGCCAG 
GGCTTCAAGG CCTGTATCCT ATCCAACAAC GGCGAACAGA GAGTTCTGGC TGTAGCCAGG 
AGCCTGGGGA TTCCATATCT TCACCGGGCT CAGAAACCCC GGCGCAGGGC TTTCTTCCAG 
GCTCTCTCCC TAATGGAAAG CCAGGCTGCC GAAACCGCAG TAATAGGCGA TCAGATATTT 
ACCGATGTCT TGGGAGGAAA CCGGGCGGGC CTGTTTACGA TTCTGGTGGT ACCCTTGGAT 
AAGAGAGAGT TTCCGGGCAC CAAAATATCC CGTTGCCTGG AATACTTTGT TTTGCGCCGT 
TTGCGCCAAG AATTAGTCGT CGGTCGCCGG ACGTCGGACG AATAG
 
Protein sequence
MFEFLYPQIY VKSLLDIPLD KLREIKINTF ILDLDNTITE WNRREVRQEI AEWFENIKGQ 
GFKACILSNN GEQRVLAVAR SLGIPYLHRA QKPRRRAFFQ ALSLMESQAA ETAVIGDQIF 
TDVLGGNRAG LFTILVVPLD KREFPGTKIS RCLEYFVLRR LRQELVVGRR TSDE