| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0516 |
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| Symbol | |
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| ID | 4281669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 610339 |
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| End bp | 613686 |
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| Gene Length | 3348 bp |
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| Protein Length | 1115 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638137400 |
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| Product | type I restriction-modification system R subunit (endonuclease) |
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| Protein accession | YP_753221 |
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| Protein GI | 114566067 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTGCAA ACTTTGATTT CCTAAAGGGG CAAGCCGAAT ATACCCTGTT TGCTACTGCT
TGTATTGAAG CGGAGCGTGT GTTGGCTACC TCTCCAGCAA TGGCAGCTAT GGGGAGCCGG
AAAGCCTGCG AACTTGCTGT AAAGTGGGTG TATTCTGCCG ATAATACTAT TACTATGCCT
TACAGGGATA ATTTGCAGTC ATTGATTCAC GAACCCTCTT TTAGATTCGT TCTTGATAAC
CAGACATGGA GCAAGCTGCT CTATATTATT AAGCTGGGCA ACCTTGCCGT ACATACGGAA
AAAGCCATCA GTCGCAGTGA TGCCGTCCTA TCTCTTTCTT TCTTGTTTGA ATTTATACAA
TGGATTGATT ACTGCTACGG GTTTAATTAT GTAGAACGCA GCTTTGATGA AGCAAAAATT
CCGGCAGAAC AGGTAATCCT TGATGTAACC AAACTCAAAG AAATAGATAG CTTGATTGAT
CAAAAAGATA CTGAAATAGA AGCCCTACGT GCCAAGATTG AGGCGATGAG CCCACAGCTT
ACCGCTGATA AAGAACACCA TAAGGAAGAA CGCCATTTTA CTCCATTGGA TATTTCGGAA
CTTCTTACCC GTAAGAAGTA TATTGATGTG GACTTAAAGC TCCTGGGTTG GGTATTTGGT
GATGATGTGC AGGAAGAAGT GGAGCTTTAC GGTATGCCAA ATCCGGAAGG AAAAGGCTAT
GCCGATTATG TACTGTATGG CAAAGATGGA CTGCCCCTTG CCGTAATTGA AGCGAAACGC
ACTTCAAAGG ACCCGAAGAT TGGTACCCAG CAGGCCAAAT TATATGCTGA CTGCCTGGAA
AAGATGACCG GCAGAAGACC CATGATGTTT ACCACCAATG GCTTTGAAAC GTACTTGTGG
GATGATTTAA CTTCTCCGCA GCGTAAGGTG AGTGGAGTCT TCTCCAAAGC CGATCTTGAA
AAGCTGATGA ACCGAAGGAA TGAACGTAAA CCTTTGGATG AAATACCGAT AGACGATAAA
ATAACTGATC GTTACTACCA AAAAGAAGCC ATCCGGGCAG TATGTGAAAA CATTGAAACA
GGTCATCGCA AATCATTGCT TGTCATGGCG ACCGGTACGG GGAAAACTAG AACCGCTTCC
AGTCTAACCG ATGTCTTATC CCGGGGTGGA TATATAACTA ATACCTTATT TTTAGCTGAT
CGTACTGCCT TGGTCAGGCA GGCTAAGAAT GATTTTAAAA CTAATTTGCC GGATATGTCC
CTATGTAATC TATTAATCAA TAAGGAGGAC AAAACAGCCC GCATAGTATT TTCAACCTAC
CCTACTATGC TAAATGCAAT TGATTCAGCC AAGAACGAAA ATGGGCAGCG GCTGTTTACC
CCTGCCCATT TTGATTTAAT TATAGTAGAT GAAGCCCACC GCAGTATCTT TAAAAAATAT
CGTGCTATCT TTGAGTATTT TGACAGTATG CTGATTGGTT TAACAGCTAC ACCCAAGCAA
GAAGTGGACC GCAACACCTA TGACTTTTTT GAGATGGAAA GCGGTGTGCC GACCTATGCT
TATGCCTATG AAACTGCTGT AGATAAAGAT CATGTCTTAG TGCCTTACCA CAATATTGAG
GTTAGAACCA GGTTCCTGGA AGAGGGCATA ACTTACGACG AACTATCCGA GGAAGATAAG
GCACGCTATG AAGAAGATTT CACAGATGAA GATGGTGAGA TGCCTGATTT TATTCCTTCC
CCTGCGGTTA ATGAGTTCAT CTTTAACCAA TGTACAGTAG ATATGGTGTT GGAAGATTTA
ATGACCAAAG GAATTAAGGT TGCTGGCGGT GACAGGCTGG GAAAAACCAT TATATTTGCA
CAAAACAAAA AACATGCGGA GTATATCGTT GAGCGTTTTA ATAAACTATA TCCGCAATAT
CACGGCAGTT TCGCCAAGCG TGTGGTTTGT GATGACAATT ATGTACAAAC AATTATCGAT
GATTTCAAAA TTGCCGAAAA AGAGCCCCAT ATTGCTGTAT CGGTGGATAT GCTGGATACA
GGTATAGATG TTCCAGAGCT GGTTAATTTA GTCTTCTTTA AACGTATCCG CTCTAAAATA
AAATTCTGGC AGATGATTGG CCGGGGTACC AGGCTATGCA AAAATCTATT CGGGGATGGA
CAGGATAAAA CCCACTTCCT AATCTTTGAT TACCTCGGAA ACTTCGAATT TTTCCGTACC
AACAAAGACG GCGTGAAAGG CAACGAAACC CAGAGCATTT CGGAAGCGAT CTTTGCTAAA
CGGGTTCGCT TAATTCATCA TCTCCAGCAA TCGGCTTTTA TGGAGGAACC TTATCAGGCC
ATTCGTACAA ATCTTATAGA TACTGTCGTA CAGCAGATAA ACACACTGAA TACAGAACTT
ATATCGGTAA AACTGCAGTT ACAGTACATT GAGAAATATA AAAATAAGGA TGCTTTCGTA
TTTCTTTCTG ACTTAGACAA ACATGACTTA ATTGTTCACC TGGCTCCACT TGTATACATG
GATGATATGG ATGAGTTTGC CAAACGATTT GACAACTTTA TGTATGGCCT GATGATTGCT
CAAATCGAGG GAGCACCACA TTTCAATAAA GGCAAGAAGC AGCTGATCAA CGTCTGCAGC
AGCCTTTCAC AGCGTATTAC TATTCCGCAG ATTAAAGAGA AAATAGAGCT TATCAATAAT
GTTGGTACAG ATGATTTCTG GCAAAATTCT GATATATTAG ATTTTGAGAA GGCACGTATT
GAACTGCGTA GCCTTATTAA GTTTATTGTT GATGAAGGCG GAGTTAGCCC AATATATACT
AACCTGAACG ATATTGTTCT TGAGGTTAAA GAAGGAGAGG GGTTAGACCC CGCCTATACA
TTTGAAGACT ATAAACTAAA GGTAAACCGT TATATTGAAG AAAACCGCGA TCATATTGCT
ATTTATAAGC TCCGGAACAA TATTCCCTTG ACTGCTTTCG ATTATAATAG CTTGGAGCAT
ATCTTCACTG GGGAACTGGG TACACCAGAA GATTATGAGC GGGAATACCA GGATACGCCT
TTCGGCCTAC TGGTACGTAA AATTGCAAAG ATGGAATATG AAGCAGCCTG TGCAGCATTT
TCTGAGTTTA TCAATGATCA GTCACTAAGC CAGGGACAAA TTGTTTTTGT AAAAAAAGTT
ATCGATTATA TCATGCAAAA CGGCTATATC GAGAATGTAT CCACGCTAAT GAAGCCACCT
TTTGATAAAC CTAAGAGTTT TATTAAGCTT TTTGATGGAT CAAAACAAAA GCAGATTGTA
GAGGCAGTTA ACCAGGTTAG GGATAATGCG GTTAAGATAG TAGGATAA
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| Protein sequence | MSANFDFLKG QAEYTLFATA CIEAERVLAT SPAMAAMGSR KACELAVKWV YSADNTITMP
YRDNLQSLIH EPSFRFVLDN QTWSKLLYII KLGNLAVHTE KAISRSDAVL SLSFLFEFIQ
WIDYCYGFNY VERSFDEAKI PAEQVILDVT KLKEIDSLID QKDTEIEALR AKIEAMSPQL
TADKEHHKEE RHFTPLDISE LLTRKKYIDV DLKLLGWVFG DDVQEEVELY GMPNPEGKGY
ADYVLYGKDG LPLAVIEAKR TSKDPKIGTQ QAKLYADCLE KMTGRRPMMF TTNGFETYLW
DDLTSPQRKV SGVFSKADLE KLMNRRNERK PLDEIPIDDK ITDRYYQKEA IRAVCENIET
GHRKSLLVMA TGTGKTRTAS SLTDVLSRGG YITNTLFLAD RTALVRQAKN DFKTNLPDMS
LCNLLINKED KTARIVFSTY PTMLNAIDSA KNENGQRLFT PAHFDLIIVD EAHRSIFKKY
RAIFEYFDSM LIGLTATPKQ EVDRNTYDFF EMESGVPTYA YAYETAVDKD HVLVPYHNIE
VRTRFLEEGI TYDELSEEDK ARYEEDFTDE DGEMPDFIPS PAVNEFIFNQ CTVDMVLEDL
MTKGIKVAGG DRLGKTIIFA QNKKHAEYIV ERFNKLYPQY HGSFAKRVVC DDNYVQTIID
DFKIAEKEPH IAVSVDMLDT GIDVPELVNL VFFKRIRSKI KFWQMIGRGT RLCKNLFGDG
QDKTHFLIFD YLGNFEFFRT NKDGVKGNET QSISEAIFAK RVRLIHHLQQ SAFMEEPYQA
IRTNLIDTVV QQINTLNTEL ISVKLQLQYI EKYKNKDAFV FLSDLDKHDL IVHLAPLVYM
DDMDEFAKRF DNFMYGLMIA QIEGAPHFNK GKKQLINVCS SLSQRITIPQ IKEKIELINN
VGTDDFWQNS DILDFEKARI ELRSLIKFIV DEGGVSPIYT NLNDIVLEVK EGEGLDPAYT
FEDYKLKVNR YIEENRDHIA IYKLRNNIPL TAFDYNSLEH IFTGELGTPE DYEREYQDTP
FGLLVRKIAK MEYEAACAAF SEFINDQSLS QGQIVFVKKV IDYIMQNGYI ENVSTLMKPP
FDKPKSFIKL FDGSKQKQIV EAVNQVRDNA VKIVG
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