| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0475 |
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| Symbol | |
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| ID | 4281386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 557042 |
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| End bp | 559195 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638137360 |
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| Product | CRISPR-associated helicase Cas3 domain-containing protein |
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| Protein accession | YP_753181 |
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| Protein GI | 114566027 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAT ATTATGCTCA TTCTACTGAA GGAGAGGAAG AAAACTGGCA GTTGCTAAAA
AAGCATTTGG AAAATGTATC ACATCGGGCA GGGATCTATG CGTCTTGTTT CGGAGCGGAA
GAATGGGGGG AACTGGCGGG GTTATTACAT GATGGAGGAA AATACTCCGA TGACTTCCAG
GATAAGCTTA AAGGCATGAA CTTAAATGTG GACCATTCTA CGGCCGGAGC CCAAATAGCA
TCTGAGCTTT ACGGAAATAG GGGATGTTTA TTGGCTTATG TTAGTGCCGG ACATCACGGT
GGTCTACCTA ATGGGGGAAG CGATGCAGAT GAGGCTTCCC TTATGGGAAG ACTGGCAAGA
AATCTTCCAA ACTATGATGC CTTTTATAAA GAGATTCTCC TACAGCCCCA ATTGCCCAGG
CTAAATTTGG GCAGGTCTGA TAAGCCGGGA TTTTCATTGT CCTTTTTTGT ACGAATGCTT
TTTTCCTGCC TGGTCGATGC GGATTTTCTT GATACAGAAA AGTTCTATAC AAAAGAAAAA
AACGAAATAA GAAAAAAATT CCCTGATATC AAAACTCTGA ATTATAAACT AGAACAATAT
ATTTATAAGA TAAGCAAAAA GGCCAAAAGT CCAATTATTA AACGAGAACG GGCACACGTA
AGGGCTTGCT GTCGGCAAGC GGCAAAAAAA GAAAAGGGCT TATTTAGTCT TAGTGTTCCT
ACCGGTGGCG GGAAAACGCT TTCTTCCCTG GAATTTGCTC TTCGCCATGC CTGTAAACAT
GGAATGGAGC GAGTAATATA TGCAGTACCT TTTACCAGCA TTATTGAACA GAATGCTGCT
GTTTTTAGAG AAGCTCTGGG AGATGATGCT GTATTAGAAC ATCATAGAAA TTATGATTTT
GAGGAAGATG AAAACAATCC CAATTACAAA CATCGATTAG CAGCAGAAAA TTGGGATGCG
CCTGTGATAG TTACCACTAA TGTTCAATTC TTCGAATCTC TTCTGGCTTA TAAACCCTCC
CGTTGCCGAA AACTCCATAA CATTGCTAAC AGTATAGTGA TATTGGATGA AGCCCAGACC
CTACCGGACA GGCTTTTGCT GCCTTGCCTG GCTATTTTAG AAGAACTGCT GCTGCGTTAT
GGTGCCACTA TAGTATTATG CACCGCAACC CAGCCGCACC TGGAAAAACT GTGGAGCAAA
GAGCTGCAAG CAACAGAAAT AATCCCTGAT AGTGAACGAC TTTACGAAGT TCTAAGTAAG
AGGGTGACGG TCAGAACGGC AGGAATTTTA AAAGATGAAG AACTAGCTAA GAAACTGGCC
GCGCAAAAGC AAGTACTATG CATAGTAAAT ACCCGCAAAC ACGCCAGAAC GCTGTATAAA
CTTTTGCCTG AAGCCGAAGG TAATTATCAC TTGAGTGCTT ATATGTATCC GAAACACCGG
AGTGACAAAA TTGCGGAAAT ACGGCAGCGT CTGGCAGAAG GAAGGACCTG CCGGGTGATT
TCTACCCAAT TAATCGAAGC TGGGGTAGAT GTGGATTTTC CGGTAGTTTA CAGGGCAATT
GCTGGAATTG ACGCCATTGC CCAGGCAGCT GGTCGTTGTA ATCGCGAAGG GATAGGTGGT
CAAGGGGAGG TTTGGGTCTT TATTCCAGAG CAGGGGGTAC CGGAAGGCTG GTTTCAACGT
ATGGCAGCAT TGGGAGAAAA AGTATTGCAT AAATATGATG ACCCCTTATC CCCACAGGCC
ATTAAGAGTT TTTTTGAATT GCGTTTTGAC CTGGCCGGAG AGCAATTAGA TGAGTTGGGA
ATACTAAAGG ACTTTGAAGA ATGTGCTAGT AAGCTATTGT TCCCGTTTCG GGATGTAGCT
GAGAAATTCA GGTTCATTGA CGATATTTCA GTACCGATAG TAATTGCTAT AGATAATGAA
TGTAAAGATA TCATCAAAAA AGCAGCTTAT AGCGATAACC CGGGAGGACT TGCCCGGAGC
TTGCAAAGAT ATACAGTAGG AATCACCCCA TGGGAAGCTA TTGCCTACGA AAAGGCAGGT
GGTATTCGTA AAGTGGCAGG TTTATTCAAT GTTATGGAGG AGGTGAATAA TTACGATGAT
AACATGGGAT TATTGCCATT GAGTAATGTT GAAACAGATA TCTATGTTGT GTAA
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| Protein sequence | MIKYYAHSTE GEEENWQLLK KHLENVSHRA GIYASCFGAE EWGELAGLLH DGGKYSDDFQ
DKLKGMNLNV DHSTAGAQIA SELYGNRGCL LAYVSAGHHG GLPNGGSDAD EASLMGRLAR
NLPNYDAFYK EILLQPQLPR LNLGRSDKPG FSLSFFVRML FSCLVDADFL DTEKFYTKEK
NEIRKKFPDI KTLNYKLEQY IYKISKKAKS PIIKRERAHV RACCRQAAKK EKGLFSLSVP
TGGGKTLSSL EFALRHACKH GMERVIYAVP FTSIIEQNAA VFREALGDDA VLEHHRNYDF
EEDENNPNYK HRLAAENWDA PVIVTTNVQF FESLLAYKPS RCRKLHNIAN SIVILDEAQT
LPDRLLLPCL AILEELLLRY GATIVLCTAT QPHLEKLWSK ELQATEIIPD SERLYEVLSK
RVTVRTAGIL KDEELAKKLA AQKQVLCIVN TRKHARTLYK LLPEAEGNYH LSAYMYPKHR
SDKIAEIRQR LAEGRTCRVI STQLIEAGVD VDFPVVYRAI AGIDAIAQAA GRCNREGIGG
QGEVWVFIPE QGVPEGWFQR MAALGEKVLH KYDDPLSPQA IKSFFELRFD LAGEQLDELG
ILKDFEECAS KLLFPFRDVA EKFRFIDDIS VPIVIAIDNE CKDIIKKAAY SDNPGGLARS
LQRYTVGITP WEAIAYEKAG GIRKVAGLFN VMEEVNNYDD NMGLLPLSNV ETDIYVV
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