| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0474 |
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| Symbol | |
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| ID | 4281385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 555024 |
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| End bp | 556259 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638137359 |
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| Product | collagenase family protease |
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| Protein accession | YP_753180 |
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| Protein GI | 114566026 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGGC CGGAACTGGT CCTCCCCGCT GGAACCCTGG AAAAACTTAA AACGGCAGTA
TTATTTGGCG CGGATGCCGT TTATTTTGCC GGCAAGGAAT TTGGCCTGAG GGCTTATGCC
GGAAACCTCA GCCGGGCTGA GATAGCGGAA GGCCTTGCCT TTGCCCACAG TAGAAAGAAG
AAGGCCTACC TGGCCGTAAA TATACTGGCC CATAACCAGG ATATGCATAA ATTACCGGCT
TACCTGGAAG AAATGGCCAG TTTGCAACCA GATGGCTTCA TAATATCAGA TCTGGGAGTA
TTACGCTTGG CGCAAAAATA TGCTCCCTCA ATTCCGCTAA CCATAAGCAC CCAGGCCAAT
ATCAGCAACT ATGAAGCGGC TTGCTTTTTT CAGGATCTGG GAGCTCGGCG GATTGTCCTG
GCGCGGGAAT TGAAACTTGG TGAAATCGAA GAAATCAAAA AGAAAAGCAG CGTAGAGATA
GAAATATTTA TTCACGGTGC CATGTGCGTA TCTTATTCGG GACGCTGTTT ACTCTCCTAC
TACATGACTG GTCGTAGCGC CAACCAGGGA GCCTGTGCCC ACCCCTGCCG CTACCGTTAC
GCCCTGGTTG AGGAAAAAAG ACCCGGGGAG TATTTTGGTA TAGAGGAAGA TGAAAGAGGC
AGTTATATAT TGAATTCCCG CGACCTTTGC CTGTTGGAAT ATATCCCCCG CCTGTTGGAA
GCGGGAGTGG ATGCCTTAAA GGTGGAAGGG CGCATGAAAA GCCCGCTTTA TCTTGCCAGT
GTGGCCAGTG TTTACCGCCA GGCCATAGAC CGGTATAGAG AAAGAACGAC CCCTTTTACA
GCTGAGGAAT TGTCGGTCTG GATGGCAGAG CTGCACAAGA CCGCTACCCG GCCCTTTACC
AGCGCTTTCA TCGGCGAAGA AGAAGACCGG GCCCAGGATA TCGACAAGGA AGAAATATCG
TTGCGGGCGC AATTTTGCGC TATTGTTACC GGTTATCGCG AGCAGGAAGG CCTGATTGAA
GTCGAACAAA GGGCTAATTT CGGCTGTGGC GATTATCTGG AATTTCTATT GCCCGGGGGA
GAACTTCTGG GGTTTGTGTT GGAAAAACTA TATGATGAAG ATTTAGCAGT CCTGGATCGG
GCCCGCCATC CCCAACAAAA GGTCTTGATT CCCTTTGACC ATGCTCTGCC CGAATTTTCC
ATATTAAGAA AAGGGGGGAC GGTAAATCAA GGATAA
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| Protein sequence | MQGPELVLPA GTLEKLKTAV LFGADAVYFA GKEFGLRAYA GNLSRAEIAE GLAFAHSRKK
KAYLAVNILA HNQDMHKLPA YLEEMASLQP DGFIISDLGV LRLAQKYAPS IPLTISTQAN
ISNYEAACFF QDLGARRIVL ARELKLGEIE EIKKKSSVEI EIFIHGAMCV SYSGRCLLSY
YMTGRSANQG ACAHPCRYRY ALVEEKRPGE YFGIEEDERG SYILNSRDLC LLEYIPRLLE
AGVDALKVEG RMKSPLYLAS VASVYRQAID RYRERTTPFT AEELSVWMAE LHKTATRPFT
SAFIGEEEDR AQDIDKEEIS LRAQFCAIVT GYREQEGLIE VEQRANFGCG DYLEFLLPGG
ELLGFVLEKL YDEDLAVLDR ARHPQQKVLI PFDHALPEFS ILRKGGTVNQ G
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