| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0473 |
|---|
| Symbol | |
|---|
| ID | 4281384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 553645 |
|---|
| End bp | 554682 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638137358 |
|---|
| Product | periplasmic solute-binding protein |
|---|
| Protein accession | YP_753179 |
|---|
| Protein GI | 114566025 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0206414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA TAAAGTTGAG ATTGGAGAAA CCTAAAGTTG TAGCAATAAT ACTGGCGGTT
CTATTTATAA TATTGGCCGG AGTTTTCTTT ACCGGACAAA TGATTGCCCG CCAGTACCAA
CCGGTGGATC CTTCTGATAA AACTATGGTG GACATTGTAA TTCCGGAAAA AACCGGTGCC
AGGCAGGTGG CAGACTTGCT TTATTATGAG CGGTTGATAC ATAAGCAAAG TGTTTTTCTG
GCCTACTGTC AGAAGAATGG TTATGATAGC AGCCTGAAGG CAGGTCACTA TCGTTTTAGC
CGCAGCCAGT CGCTGAAAGA GATTGTTGAT GATCTTGTTC AGGGCCGGAT AGTCAATATT
TCTTTTACCA TTCCCGAAGG TTATACCCTG GAACAAATTG GGCGACTGCT TATTAAGAAA
CAGCTTTGCA GTCAGGAAGA ATGGAATATG AGTATAAGAC AGGATTATGA TTTTGCTTTT
TTAAAAGCTC TTCCTTTAGA AAACGAGAAC CGGCTGGAGG GTTTTTTATA TCCGGAGACT
TATTTTGTTC CCGAAGATTA TAATTGCCAG CAGGTAATTG TGCTTATGCT AAACAATTTT
GAGCAGGTAT GGCAAAAGAA GTTTGCCGAG CAGGCCCAGG CTAAAAATTG GAGTGTTTAC
CATACCATCA CTCTGGCCTC CCTAATAGAA AAAGAAGCTC AGGTGCCGGA AGAAAGAGCG
ATGATTGCGG GAGTGATACT AAATCGCTTG AATGCCGGTA TGCTGTTGCA GATTGACGCC
AGTGTACTCT ATGCCCTGCA GAGGCATAAG GAGCTGGTCA CCTACGCCGA TTTGGAAGTA
AACTCCCCGT ATAATACCTA CAAGTATGCC GGTTTGCCTC CGGGTCCAAT TGCTTGCCCG
GGCGAGGCTT CAATAAATGC CGCTCTTAAT CCTAAGGAGC ATTCTTATTA TTATTATGTT
GCCAAAGGAG ACGGGAGTCA TTTCTTTTCC CGGACTTATA GGGAACATCT GCAGGCGCAG
GAAAAATATG GACAATAA
|
|---|
| Protein sequence | MSEIKLRLEK PKVVAIILAV LFIILAGVFF TGQMIARQYQ PVDPSDKTMV DIVIPEKTGA
RQVADLLYYE RLIHKQSVFL AYCQKNGYDS SLKAGHYRFS RSQSLKEIVD DLVQGRIVNI
SFTIPEGYTL EQIGRLLIKK QLCSQEEWNM SIRQDYDFAF LKALPLENEN RLEGFLYPET
YFVPEDYNCQ QVIVLMLNNF EQVWQKKFAE QAQAKNWSVY HTITLASLIE KEAQVPEERA
MIAGVILNRL NAGMLLQIDA SVLYALQRHK ELVTYADLEV NSPYNTYKYA GLPPGPIACP
GEASINAALN PKEHSYYYYV AKGDGSHFFS RTYREHLQAQ EKYGQ
|
|---|
| |