| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0468 |
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| Symbol | alaS |
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| ID | 4283498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 547849 |
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| End bp | 550491 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638137353 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_753174 |
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| Protein GI | 114566020 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00473822 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGAGCA GTGCAGAAAT CCGGAAAACC TTTCTGGAAT ATTTTGAAGA AAGAGGGCAT
AGCGTGGTGG AAAGCTCCTC GCTAGTGCCG GTCAATGACC CCACTCTCTT GTTTACCAAT
GCCGGCATGA ATCAGTTCAA GGATGTTTTC CTGGGACTGG ATAAACGCAA ATATGTTCGG
GCTACCAGCT CCCAGAAGTG CGTTCGGGCA GGAGGGAAAC ATAATGATCT GGATACCGTA
GGGCGAACCC CGCGGCATCA CACCTTTTTT GAAATGCTGG GTAACTTTTC TTTCGGTGAT
TACTTTAAAC GCGAGGCTAT TGGCTATGCC TGGGAATTCC TTACCGAGGT GGTCGGACTT
CCTGAGGAAA AACTCTGGGT AACTATATAC CAGGATGATG ATGAGGCGGC TGATTTATGG
CCGGAAATAA GCGGGATTGA CCCCGGGCGA ATTGTCAGGT TGGGGGAAAA GGATAATTTT
TGGAGCATGG GGGATACCGG TCCCTGTGGT CCCTGCAGCG AAATACTCTA TGACCGGGGA
ATTGAGTATT CCTGCGGAGC TCCCGACTGT GGCATCGGGG TTTGCGATTG TGACCGCTGG
CTGGAAATCT GGAACCTGGT CTTTATGCAG TTTAACCGGG ATGAAAGCGG CGAGATGACT
CCGCTGCCCC GCCCCAGTAT TGATACCGGC ATGGGCTTGG AAAGATTGAG TTCAATTTTA
CAGGGAGTGG ACAGCAATTT TGATACGGAT TTATTTATCC CCATTATTAA AAGGATTGAA
GAACTGACCG GAAAAGCCTA TGAGCAGGGG GAAAGAGGTT TTCCCTTCCG CGTAATTGCT
GACCACAGCC GGGCCTGCAG TTTTTTGATT GCCGATGGTG TGCTTCCCAG TAATGATGGA
CGGGGTTATG TTCTGCGCCG AATATTGCGC CGTGCCTTGC GTTTTGGACG ATTCCTGGGC
ATTGAGGGCT CTTTCCTCTA TAAAAATGTG GATGTGGTCT GTGACATAAT GCAAGAAGCT
TATCCCGAGT TGCTGGAAAA ACAGGATTTT ATCAAAGAAG TAATTCGTTT GGAAGAAGAA
CGATTTCTGC TTACCTTGAA TGATGGTTTG AAAAAAGCGG AAGAAATAAT GGAGCGGGCG
CGGCAGCGGG GTGATAATGT AATTCCGGGA GAAGAAGCGT TTATGCTTTA TGATACATAT
GGCTTTCCTT TGGATTTAAC TGAAGATATG GCGGAAGAAA ACCAATTCAC GCTGGACAAA
GCGGGTTTTG ACCGGAGTAT GGAAGAGCAG CGTCAACGGG CGCGGCAGGC CAACAAAGGG
GAAGATTTAC TAGGACAGGA GCGCCTGTTG TCGGAAAAAC TTGCGGGCAT CGCCCCCAGC
AGCTTTACCG GTTACGAAAA TAGCAGGGAT GAGTCCGTGC TCCTGGCCAT TATTAAAGGC
AGCGAACTGA TGGATAAAGC GCTTAATGGC GAAGAAGTGA TTTTAATTAC GGCCCGAACT
CCTTTTTATG CGGAGAGCGG GGGACAGGTA GCGGACTGTG GTATTATAAA GGGACAGGAA
GGATTACTAC GGGTGCAGGA TGTCAAGAAG CTCAGTGCCT GGATTCTCCA TTATGGAATA
GTGGAGGGGG TCCTAACAAC TGGTGAAGGG GTTAGTTTGC AGCTGGATGA CCCGGCCCGG
ATGGATACGG CCAGAAACCA TACTGCCACT CATCTTTTGC ACCGGGCCCT GCGTGAAGTG
CTGGGGGAAC ACGCCCAGCA GAAAGGTTCG CTGGTTGAAC CCGCCCGCCT GCGCTTTGAT
TTTTCTCACC TCAAGGCTCT AAGTAGTGAA GAACTTTCCC GGATTGAGCA GATGGTAAAT
GAGGCCATAT GGAAGCTTTA TCCCGTGACC ACCACGGTAA CCGCTCTGGG CCAGGCCCGG
GAAATGGGGG CTATGGCCCT TTTCGGAGAA AAATATGGGG AAGAAGTAAG AGTGGTTCAG
GTTGATACAT ACAGCAGCGA ACTCTGCGGT GGTACTCATG TACAAAACAC TGGCCAAATT
GGTTTGTTTA AAATTACCGG AGAAGGAAGC ATTGGCTCAG GACTGAGAAG AATTGAAGCC
ATAACCGGTA GCTATGCCCT GGAATATATC AAACAGCTGG AAGACGAGTT AAAAAAGGCG
GCTTCCGCTT TGCGCAGCTC ACCGCTGGAG CTGGCAAAAA GGATTGAAAA TTTGAATAAC
TCACTGAAGG AAAAAGATAA AGAGATTGAA AACCTGCTGC AGCGTTTATC GCGTTCTTCC
AGTGATGAAC TGGTGAACAA GGCCTTCCAG TTAAATGATG CCTGGATCTT GATTGAAGAG
GTGGATATTG AAGACCCGGG CAGCCTGCGC CAAAACGCCG AGATGCTGAA GGATAAGTTG
GGCCGGGCTA TAGTTATGTT GGCTTCAATA AAAGGGGAAA AAGTATCTTT TGTTTGTTTT
GTGAGCAAAG ATTTGCTGGA GCAGGGACTC CATGCCGGCA AGATAGTTGC TGCCGCCGCT
CAAGTAGCTG GAGGCGGAGG TGGAGGGCGT CCAGATATGG CCCAGGCTGG AGGCAGGGAC
AAGAGCAAAA TTTCTGAGGC TTTGGCCGAA GCCAGAAAAA TGGTGAAAAA AACCTTATCC
TAA
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| Protein sequence | MWSSAEIRKT FLEYFEERGH SVVESSSLVP VNDPTLLFTN AGMNQFKDVF LGLDKRKYVR
ATSSQKCVRA GGKHNDLDTV GRTPRHHTFF EMLGNFSFGD YFKREAIGYA WEFLTEVVGL
PEEKLWVTIY QDDDEAADLW PEISGIDPGR IVRLGEKDNF WSMGDTGPCG PCSEILYDRG
IEYSCGAPDC GIGVCDCDRW LEIWNLVFMQ FNRDESGEMT PLPRPSIDTG MGLERLSSIL
QGVDSNFDTD LFIPIIKRIE ELTGKAYEQG ERGFPFRVIA DHSRACSFLI ADGVLPSNDG
RGYVLRRILR RALRFGRFLG IEGSFLYKNV DVVCDIMQEA YPELLEKQDF IKEVIRLEEE
RFLLTLNDGL KKAEEIMERA RQRGDNVIPG EEAFMLYDTY GFPLDLTEDM AEENQFTLDK
AGFDRSMEEQ RQRARQANKG EDLLGQERLL SEKLAGIAPS SFTGYENSRD ESVLLAIIKG
SELMDKALNG EEVILITART PFYAESGGQV ADCGIIKGQE GLLRVQDVKK LSAWILHYGI
VEGVLTTGEG VSLQLDDPAR MDTARNHTAT HLLHRALREV LGEHAQQKGS LVEPARLRFD
FSHLKALSSE ELSRIEQMVN EAIWKLYPVT TTVTALGQAR EMGAMALFGE KYGEEVRVVQ
VDTYSSELCG GTHVQNTGQI GLFKITGEGS IGSGLRRIEA ITGSYALEYI KQLEDELKKA
ASALRSSPLE LAKRIENLNN SLKEKDKEIE NLLQRLSRSS SDELVNKAFQ LNDAWILIEE
VDIEDPGSLR QNAEMLKDKL GRAIVMLASI KGEKVSFVCF VSKDLLEQGL HAGKIVAAAA
QVAGGGGGGR PDMAQAGGRD KSKISEALAE ARKMVKKTLS
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