Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0456 |
Symbol | |
ID | 4283486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 535502 |
End bp | 537262 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638137341 |
Product | hypothetical protein |
Protein accession | YP_753162 |
Protein GI | 114566008 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCAGATC TAACAGTTAA TGAGATTACC AGTATACTTG AGGGTTTGAT TGAAAATCCC TATATGTTCT ATGTGATTGT TGACAGTGAT GGAATAATTA GCTCCATTAA CCAAACCTAC CTGGATATTC TGGAGATGAA GAAAGAAGAT GTCGTAGGAA GGAATATTCT GGATATAACC CCTAGTTCAG GGTTACCTGA GGTTTTGCGA ACCGGTCGTA TGGACAAGGC GGACATTTGG ACAGTAAAGG GAAGGGATAC CATAGTAACC AGGGTGCCGA TTATTAAGAA CGGGAAAATA ATCGGGGCTA TTGCCAGTAG CCTTTTTTTG GACATGTCCG GGGCCAAGAT TCTTATGAAA AAACTGCAGG AAACGGAGAA GGAATTCACC GCTATTCTGG AGGGTTTGAT AGAAAGTCCT CATATGGCCT ATGTAATTGT TGATAAAGAA GGTTATATTA CGGTAATGAA CCAGACCTTT TTGGATATTT TGGAGATGAA AAAAGAGGAG GTAATAGGCA AATATGTACT GGAAATCCTG CCTCATTCCA AGATGATAGA AATACTGAAA ACCGGCAGGG TGGATAAAGC AGATATATGG CCTATCCGAG GCCAGGATAC CATAGTTACC CGTACCCCCA TCATAAAGCA TGGCAAGATA ATAGGAGCTA TCGGACACAG CCTGTTCCTG GATATGTCCG GGGCTAAAAT CCTGGCCAAG AAACTGCAGG AAACGGAGAA GGAATTAAGC CTTTACCGGG ATGAGGTAAG TCAGATATAT AGTGCCAGGT GGATCTTTGA CGATTTGGTT GGTTGCAGTC AGGAGTTCCT GGCGGTAAAG TCCATGGCCC GGCAACTTTC TTACAGCATA TCTACGATTC TCATTACCGG AGAAAGCGGT ACCGGCAAGG AACTCTTTGC CCAGGCCATT CATAATGGCA GTGAAAGGAA AAATTGGCCT TTTGTAAGAA TAAATTGTGC CGCCTTGCCC GAAAATTTGC TGGAGTCAGA GCTTTTTGGC TATGAAGAAG GAGCCTTTAC CGGGGCTAGA AAGGGTGGGA AACCGGGAAA ATTTGAACTG GCCAAGGGGG GGACTATTTT CCTCGATGAA ATCGGCGATA TGCCCTTGAC CATGCAGACC AAGCTCTTAA CAGTTTTACA GGAAAAAGTG GTGGAAAGGG TGGGAGGAAC CACCCCAATA GCTATTAATG TCCGCGTAAT CGCCGCCACC AACCGCGACC TGGAAAAAAT GGTGGAAAAT CAGGAGTTTC GTGAGGATCT ATATTATCGC CTCAATGTTG TAGGATTGAA TATACCCCCT TTGAGAAGGC GAATGGATGA TATTCCCCTT TTGGTTAATG ATTTGATTCA TAGAATAAAC CAGTGTTTGA AAACCGATAT TTCCGGGATT GAGCCAGAAG CGATAGATTT ACTGCAGGAA TATTCCTGGC CCGGCAATGT ACGGGAACTG GAGAACCTGC TGGAAAGGGC CATAAATTTG GCACTAATGC ACGGCGAGCA GTTAATCCGG ATGGAGCATT TTCCTTCTCT GAATCAGAAA AACAAGGATA AGAAATTTGC TAAAATCGAG ATACTGGATG ACGGGCAGAG CAGTCTTCCC CAGCTTATCG AGAAGATAGA AAAACAGATG ATAATCCAGT ATTTGCAGGA AAGTGGGGGA AACAAACAGC AAACCGCCAA GATGCTGGGC ATTCACAGTT CCGCTTTGTA CCGTAAATTG AGTAAATACG GCCTGGAATA G
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Protein sequence | MSDLTVNEIT SILEGLIENP YMFYVIVDSD GIISSINQTY LDILEMKKED VVGRNILDIT PSSGLPEVLR TGRMDKADIW TVKGRDTIVT RVPIIKNGKI IGAIASSLFL DMSGAKILMK KLQETEKEFT AILEGLIESP HMAYVIVDKE GYITVMNQTF LDILEMKKEE VIGKYVLEIL PHSKMIEILK TGRVDKADIW PIRGQDTIVT RTPIIKHGKI IGAIGHSLFL DMSGAKILAK KLQETEKELS LYRDEVSQIY SARWIFDDLV GCSQEFLAVK SMARQLSYSI STILITGESG TGKELFAQAI HNGSERKNWP FVRINCAALP ENLLESELFG YEEGAFTGAR KGGKPGKFEL AKGGTIFLDE IGDMPLTMQT KLLTVLQEKV VERVGGTTPI AINVRVIAAT NRDLEKMVEN QEFREDLYYR LNVVGLNIPP LRRRMDDIPL LVNDLIHRIN QCLKTDISGI EPEAIDLLQE YSWPGNVREL ENLLERAINL ALMHGEQLIR MEHFPSLNQK NKDKKFAKIE ILDDGQSSLP QLIEKIEKQM IIQYLQESGG NKQQTAKMLG IHSSALYRKL SKYGLE
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