| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0449 |
|---|
| Symbol | |
|---|
| ID | 4283393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 530502 |
|---|
| End bp | 531305 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638137335 |
|---|
| Product | glutamate racemase |
|---|
| Protein accession | YP_753156 |
|---|
| Protein GI | 114566002 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0796] Glutamate racemase |
|---|
| TIGRFAM ID | [TIGR00067] glutamate racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGGAAAA ACGAGCCCAT AGGCATTTTT GACTCAGGGG TAGGGGGATT GACGGTAGTA
AAATCCTTGA TGGAAAAAAT GCCTGATGAA AGCTTTATCT ATTTTGGAGA TACAGCTCAT
GTACCCTATG GAAACAAATC GGAACAACAG CTGTTTAATT ACGCCCATAA GATTATTTCC
TTTCTCATAA GTAAGCAAGT AAAAGCGATT ATTGTAGCCT GTGGTACCCA TTCCTCGGTT
ACCCTTCCCT CGGTTTTGCA GGAGTATAGC TTGCCTATGC TGGGGGTGGT TAAAGCCGGT
GCCCGGTCAG CAGCAAGGCT CAGCCGCAAT GGAAAAATAG GAGTGGCAGC TACGCAAGCC
ACCGTAAACA AGAAAGCTTA TACCCGGGAG ATTCAGGAAC TGGAACCAGA TTTTCAGGTT
TACGAAACGG CTTGTCCTCG CTTTGTTCCC CTGGTGGAGG CCGGGAAGTT GAACAACAGC
GAAAGCCGGG AAGCGGTAGC AGAATACCTG GGGCCTTTAC TGGCCCAGGG TATTGATACC
CTGGTTCTGG GTTGTACCCA TTATCCTTTC CTGGCAACTG CCATCAGTGA ATTTGCGGGC
GAAAAGCTCG AGCTGGTAGA TACTTCTTGT GAGACTATTG ACGAATTACA GGAAATATTC
GGGGCCCAGG ATCTTTTTAA CAACAGTGGC AAAAAGCCGC GGCATGAATT CTATGTCAGT
GGGCATGATG ATTCCTTCTT TAATGTGGGG AGACTTTTGA TGGGTGATAT AATAAAGGAA
ATTCACAAGC TGGATTGGGA TTGA
|
|---|
| Protein sequence | MGKNEPIGIF DSGVGGLTVV KSLMEKMPDE SFIYFGDTAH VPYGNKSEQQ LFNYAHKIIS
FLISKQVKAI IVACGTHSSV TLPSVLQEYS LPMLGVVKAG ARSAARLSRN GKIGVAATQA
TVNKKAYTRE IQELEPDFQV YETACPRFVP LVEAGKLNNS ESREAVAEYL GPLLAQGIDT
LVLGCTHYPF LATAISEFAG EKLELVDTSC ETIDELQEIF GAQDLFNNSG KKPRHEFYVS
GHDDSFFNVG RLLMGDIIKE IHKLDWD
|
|---|
| |