Gene Swol_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0427 
Symbol 
ID4281373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp506740 
End bp507888 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content47% 
IMG OID638137315 
Product(R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative 
Protein accessionYP_753136 
Protein GI114565982 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATC TACCTGAAAA TTTTAAAAGC TATTCTGAAG CCCGCCAAGA AGGTTTTATA 
CGCTTAAAAG GTTTAAAGGA ATCCGGCAAA AAGGTGGTAG GAGTGTTTTG CTCTTATACT
CCCACTGAGC TAATTCTGGC GGCTGATGCG GTTCCCGTTG GCTTATGTGG AGCCAGTGAG
GACCCCATAT CCTATGCAGA AAAAACCCTA CCCAAGAACC TGTGCCCGCT TATAAAATCC
AGTTATGGTT TTGCTGCCTC CGATACGTGC CCCTATTTCT ATTTCTCGGA TTTGGTAGTA
GGAGAAACAA CCTGCGATGG TAAAAAGAAA ATGTTTGAAT GGATGAATGA AATCAAACCT
ACCCATGTTA TGCAGCTGCC TCCAGGGCGC ACCAGCGGTA CCGCGCTGGC TACCTGGCAC
AGCGAGATGC AGCGGCTAAA AGATGTTCTG TCCCGGACAT TGCAGGTCGA GATCACCGAT
GATGATCTGC GCCAGGCCAT TCATCTTAAG AATCGGGAAA GGAAGGCCAT TCTTGATTTT
TATGATATAG GCAGTCTAAA GCCCACCCCT CTTTCCGGAT ATGAAATCAA CACCCTGATC
GATAACAACA CTTTTCTGTT TGATACCGAA GAAAAGATCG CCATATTGGA AAAACGAACA
GCTGAGTTAC TAGAGGATTA TGAGAAAAAC TTTAAGGGAA AACCCTCCCG TCCGCGGATC
TTGATTACCG GTTGCCCTAC CGGAGGTGTG CGGGAAAAGA TCATCCGCCG GATCGAAGAA
CTAGGAGCCA ACATTGTGGG CTTTGAAAAC TGCTCGGGGC CGCGGGAACA AAAGGATCTG
GTGGACGAAA ACAAAGACCC CTTGCTGGCT CTGGCCGAAA AATACCTGCG AGTAAATTGT
TCGGTAATGA GTCCAAATCC CCAACGTATC GAGGCAATGG ATGAAATGAT CGAAAACTAC
CAGGTGGACG GCGTGATCGA GGTGATCCTT CAGGCCTGCC ATACCTTTGC CATTGAATCG
AGTCGGATAA AAAAGTTCGT AACCGAGCAA AAGCACCTGC CCTATCTTTG CCTGGAAACC
GATTATTCTC AGGGCGACAC CGGTCAAATA GATACCCGGA TCAGCGCTTT TTTAGAGATA
CTTGCGTAG
 
Protein sequence
MLNLPENFKS YSEARQEGFI RLKGLKESGK KVVGVFCSYT PTELILAADA VPVGLCGASE 
DPISYAEKTL PKNLCPLIKS SYGFAASDTC PYFYFSDLVV GETTCDGKKK MFEWMNEIKP
THVMQLPPGR TSGTALATWH SEMQRLKDVL SRTLQVEITD DDLRQAIHLK NRERKAILDF
YDIGSLKPTP LSGYEINTLI DNNTFLFDTE EKIAILEKRT AELLEDYEKN FKGKPSRPRI
LITGCPTGGV REKIIRRIEE LGANIVGFEN CSGPREQKDL VDENKDPLLA LAEKYLRVNC
SVMSPNPQRI EAMDEMIENY QVDGVIEVIL QACHTFAIES SRIKKFVTEQ KHLPYLCLET
DYSQGDTGQI DTRISAFLEI LA