| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0426 |
|---|
| Symbol | |
|---|
| ID | 4281372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 504858 |
|---|
| End bp | 506354 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638137314 |
|---|
| Product | ABC-type sugar (aldose) transport system, ATPase component |
|---|
| Protein accession | YP_753135 |
|---|
| Protein GI | 114565981 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGAGA GCAGAGAATT TATTTTGGAA ATAGCTCAAT TGAATAAAAC CTATTCCGGT
AATCGGGTTT TGAATAATAT TAATTTTGAT TTGAAACTTG GTGAGGTCCA TGCCCTGGTG
GGTGAAAACG GTGCGGGCAA GTCCACTCTC ATTAAGATTA TTGCGGGTGT TGAAAAACCC
GATCCGGGTG CGGAAATTCT CTTCGGTGGC TGCCCGGCAA TCAATCTGAA CCCTTCAAAA
TCAGTACAGA TGGGCATTTC CGTCATATAT CAGGACATTA GCCTTTTCCC CAATCTCTCG
GTAGCTGAAA ATATATGTAT TGGCGGACAG AAAGGCTTAT TCATAAAATG GAAACAGGTA
TTTGAAACCG CTCGGTCCGC CTTGATTAAA CTGGGGGCAA TAGATATTGA TCCCCATGTC
CCGCTTGGCG AAATCAGCAT AGGTCAACGT CAAATGGTAG CCCTGGCCCG TGCTCTGACT
CATGAGGCCC GGGTTATAAT TATGGATGAA CCTACGTCCT CTCTCTCTGC TAATGAGATC
AAGGCTCTCT ATAGCGCCAT TCAAATTCTA AAAAATGAAA ACAAGTCCTT AATCTATATA
TCCCATAAGT TTGAAGAAGT GTTTGAGGTG GCTGACCGAA TATCAGTGCT CCGCGACGGT
GAGATGATAG CAAGCAAAGC TGCCTGGGAA TTTGACGAAC AGAGCTTGAT TAGCATGATG
GTCGGCCGGG AGATCAGATT TCTGCCCATG CGCAACGATG GGGTAGCCGG TAAAAAGCTA
CTTGAGGTCA GAGGACTGAC CAAAGAACCG TTGTTCAGGA ATATTTCCTT CTCCCTGTAC
GAAAACGAGA TATTGGGTAT AACCGGACTG GTAGGGGCAG GACGAAGCGA AATGGCACAG
ACCTTGTTTG GCCTTGAGAA AGCGGATAAA GGCCGCATAT TCATGGGGGA GAAAGAACTC
AGCATAAAAT CAGCAGTTGA TGCAATAAAG AGCGGGATTT GTTACCTGCC TGAAGACCGG
AGAGGCCAGG GAATATTTCT AATTCAAAGC ATGGCTCGAA ACATTACTAC CGCGAAGCTT
GAGTCTATAT TAAACCGCTG CCGTCTGCTG AGCCGCCCCA AGGAAATGGC CGTTAGCGAG
TATTATATGG ACAGGCTTAA CATAAAACCT AGGCTGCCCG ATATTAGTGC TGATAAAATG
AGCGGTGGTA ACCAACAGAA GTTATTGTTC AGCCGCTGGT TGAATGCCCG GCCGCAAATC
TTGATTGCCG ACGAACCAAG CAGCGGTATT GATGTGGCTA CCAAGGCGGA AATTCACGGG
CTTTTGCGAG AACTGGCAGC ATCCGGGGTG GGGGTTATAT TGATCTCTTC TGACTTGCCT
GAAACCCTGG CAGTCTGCGA CAGAATACTG GTAATGCGCA ACGGCAATAT AGTGGATCAA
ACAAGCAGCA AGGAATCAAG CCAGGAAGAA CTTATCAGGA AAGGACTAAT GGGATAA
|
|---|
| Protein sequence | MQESREFILE IAQLNKTYSG NRVLNNINFD LKLGEVHALV GENGAGKSTL IKIIAGVEKP
DPGAEILFGG CPAINLNPSK SVQMGISVIY QDISLFPNLS VAENICIGGQ KGLFIKWKQV
FETARSALIK LGAIDIDPHV PLGEISIGQR QMVALARALT HEARVIIMDE PTSSLSANEI
KALYSAIQIL KNENKSLIYI SHKFEEVFEV ADRISVLRDG EMIASKAAWE FDEQSLISMM
VGREIRFLPM RNDGVAGKKL LEVRGLTKEP LFRNISFSLY ENEILGITGL VGAGRSEMAQ
TLFGLEKADK GRIFMGEKEL SIKSAVDAIK SGICYLPEDR RGQGIFLIQS MARNITTAKL
ESILNRCRLL SRPKEMAVSE YYMDRLNIKP RLPDISADKM SGGNQQKLLF SRWLNARPQI
LIADEPSSGI DVATKAEIHG LLRELAASGV GVILISSDLP ETLAVCDRIL VMRNGNIVDQ
TSSKESSQEE LIRKGLMG
|
|---|
| |