| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0390 |
|---|
| Symbol | |
|---|
| ID | 4281154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 467559 |
|---|
| End bp | 468188 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638137278 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_753099 |
|---|
| Protein GI | 114565945 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3863] Uncharacterized distant relative of cell wall-associated hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00147256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCAAGA AAAGCCCATT TCAGAGTTGG ATTAGCTTAT TGATATTTCC CAGCTTGACC
ATCATCCTGG CTTTAAGTAT TGTGGTGCAA AACCAGGCGA TTTTCAGCAA TAGTGATGCG
GTCATGTACA CTTATCTGAA AAACGCTTGC CAGGGCCAGG TCGGATATGC TTATATGAGC
AATTGTGGCA ATAATATCAC TTTTGCCGAA CTGGAACCGG GGGATATTTT GTTGGGAGGC
TACCCGGATT GCGCTTATGG TCGTTTTTCT CATGCTGGCA TTTACCTGGG AAAGGGACAG
GTAGCCGAAG GCTATGTTGA CCTGGGGATT ACTATCCAGA CCCTGGATCA TTATCATAGC
TATAGCGATA TATGCCTGCT TAAAGTAAAA GCCCCCCAGG ATGTAAAGTC GAAAGCCGTT
GACTATGTTC GGAAACAGGA AGGGAAAATA TTCTATCCCC TGGCCTTTAA ACCGGGAGAC
AGGTGGTGGA ATTGCAGTAA AATAATGTGG AAGGCCTATT ATAAACAAGG AATCAATCTT
ACTCCGGAAG CTGATTTCTG GATAGCACCC GATGCCTTTT ACCAAAGCCC GCTGGTCGAT
ATTATTGCGG AAGAGGGATG GTTCAAATAA
|
|---|
| Protein sequence | MLKKSPFQSW ISLLIFPSLT IILALSIVVQ NQAIFSNSDA VMYTYLKNAC QGQVGYAYMS
NCGNNITFAE LEPGDILLGG YPDCAYGRFS HAGIYLGKGQ VAEGYVDLGI TIQTLDHYHS
YSDICLLKVK APQDVKSKAV DYVRKQEGKI FYPLAFKPGD RWWNCSKIMW KAYYKQGINL
TPEADFWIAP DAFYQSPLVD IIAEEGWFK
|
|---|
| |