Gene Swol_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0382 
Symbol 
ID4281216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp455774 
End bp456985 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content51% 
IMG OID638137270 
Productcopper amine oxidase-like protein 
Protein accessionYP_753091 
Protein GI114565937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCA AGTCGTTTTT GTTTACTTTG CTGCTGGCAA TGCTATTTGG TCTGGCAGGT 
TCAGGTCTTA TTCTCCCTGC GTTGGCTGCG GATACTCAGC CGGTAAAGAT TTTCGTGGAT 
GGCCGGCAGG TGGATCCGGG AGAGGCTGCT CCCTTTATCA AGAATGACCG GGTCATGGTC 
CCGCTGCGCG TAATTAGCGA AGGACTGGGG CTCAATGTGG ACTGGGATGC GGAAAACTAC 
CGGGTATTAA TCAGCAGTTC ATCACCGGCG AATCTCTCCT CGTTGCCGGC GGATGGCAAA 
GGCCAGTTTG TCAAGATTTA TTTTGATGGC CGGGAGATTA AACCGGATGA TGTATTACCT 
CTTATAGAAA ATGACCGGAC CATGGTGCCC TTGAGGTCCA CTTTTGAAGG AATGGGTATG 
AAGGTGGACT GGGACCCCGC CAATTACCAG GTAATAGTCA TGACTGCCCA GGCCCTGCCG 
GTAGACTTCA GCACCATGGT GCCCTTGAGG TCCACTTTTG AAGGAATGGA TATGAAAGTT 
GACAGGGATG ATACCAACCA CCAGGTAATA GTCATTGATT CTCCCCAGCC GGCAGCAGTT 
AATAACGATT ATGAAATAAG CATAATGGGT AATTCCACTG CTACAGCGGA GCAATTGAAA 
GCCCTCTTGC AGGAGAACAA CCCGCTGGCA CCAGATCTGG TTGAACTCTA CCTGCAGATG 
GGAAGGGAAT ATGGGGTAAG AGGGGATATT GCCTTCTGCC AGGCAGCCAA AGAAACCGGC 
TGGTGGAAAT TCGGGGGACT GGCCTTGCCG GAGCAGAATA ATTATTGCGG CTTAAGCGTT 
ACCGGTAAGG CAGCTACAGC TACAGAGGAT TTGCGAGGAG CCAATCCCCA AAAAGTGCGT 
TTTATTGAAG GTAAGCACGG GGCCTTTTTT GACAGCCCGG CCAGCGGAGT GGAGGCACAT 
ATTCAACACC TTTATGCCTA CGCAACCACC GCGCCCCTGC CGGCTGGGAA AGAACTATTG 
GATCCCCGAT TTATCTTGGT GAAGAGAGGC TGTGCTCCTC GCTGGATAGA CCTGGGAGGC 
AAGTGGGCCA CACCAGGTTT TGACCGCAAT AAGTATAGCT GCTTTGACGA AGCCTTTGCT 
GCGGAGGATA CCTATGGACA CAGCATCCTG GCTAATTACT ACTGGAAGGC GCTTCCCCCT 
GCCACCATAT AA
 
Protein sequence
MKSKSFLFTL LLAMLFGLAG SGLILPALAA DTQPVKIFVD GRQVDPGEAA PFIKNDRVMV 
PLRVISEGLG LNVDWDAENY RVLISSSSPA NLSSLPADGK GQFVKIYFDG REIKPDDVLP 
LIENDRTMVP LRSTFEGMGM KVDWDPANYQ VIVMTAQALP VDFSTMVPLR STFEGMDMKV 
DRDDTNHQVI VIDSPQPAAV NNDYEISIMG NSTATAEQLK ALLQENNPLA PDLVELYLQM 
GREYGVRGDI AFCQAAKETG WWKFGGLALP EQNNYCGLSV TGKAATATED LRGANPQKVR 
FIEGKHGAFF DSPASGVEAH IQHLYAYATT APLPAGKELL DPRFILVKRG CAPRWIDLGG 
KWATPGFDRN KYSCFDEAFA AEDTYGHSIL ANYYWKALPP ATI