| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0381 |
|---|
| Symbol | |
|---|
| ID | 4281215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 453973 |
|---|
| End bp | 455466 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638137269 |
|---|
| Product | sensory box histidine kinase/response regulator |
|---|
| Protein accession | YP_753090 |
|---|
| Protein GI | 114565936 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGGA GGATATGGTG GGCTGAATCA TCAATTGTCC AAGGAAATGG TAATCCTGCC
GATATGGCCA AGAGTCAGTT TTTGGCGAAC ATGAGCCACG AAATACGTAC TCCCATTATC
GGCATACTGG GCTCGCTCGA CCTGCTCGAT CAAAGTGATT TAAGTCAACA ACAGGCCACT
AACATTTCCA TTATCCGCGA ATGTGGGGAA CAGCTGTTAC AGATAGTTGA TAATATCCTG
GATGTATCAA AAATCGAATC AGATCCGGTC ACTCCTAATT TGGAGCCATG TAATTTGGGA
GAGTTAATTA TTGCTACTGT AAACAGGGTT GATACATTGC TCAAAAGAAA AGGTCTTGAC
TTTAAATTGA ATATTGATAG CCGGATACCT GCAAAGATTA TGCTTGATAA GACCAAACTG
CAGCAGGTTT TACTCAATCT CCTCTATAAC TCTATTAAGT TTACCCCGCA AGGAAGAGTT
GAGTTAAAAG CAAAGATTCA ACCAGGTGAT TCATACCGCT TGCTTTTTAC CATTAGCGAC
ACCGGAATAG GTATCCCTTC GAGTTTTGTG GAGAGGGTAT TCGAGCCCTT CACTCAGGCT
GACAATTCCA ACTCCCGCCA GTATGGGGGA GCAGGTCTGG GCCTTTATAT TTGCAAAAAA
TTGCTGGAAT TGATGGAGGG GGAAATAAGT TTAAGCAGTA TGCCCGGTGT TGGTACAACG
GTTAGTTTCA GTATCCCTCT AATAGAAATG GATAAGGTTG AAATAGAGGT TCCGTATGAA
TTAAATAGAG AGCAATTTGA AAACAAAGAA GAAGCTCTGC TGGATTTTAC CCCTATTCGG
GTACTGCTGG TTGAGGACAA CCCCCTCAAC CAAAAAATCG TGGGCCAGAT GCTATACAAT
TACGGCTTTG AAGTAATTAT GGCTTCCAAT GGACTGGAAG CCTTAAGAAT TCTTCAAGAT
AAGCCGGTTA ACATAGTTTT AATGGATATG CAAATGCCGG TTATGGATGG CTATGAGGCC
ACCCAGTTTA TCCGCCAGCA TAGTAAATGG AGGGATATTC CTATAATAGC TATAACCGCT
CATTCTCTGC CGGGAGATCG GGAAAAATGC CTGGCCTGCG GCTGTACCTC CTATATTGCC
AAACCCTTCA AAGCCCATGA GTTGGTACAA CTGATGAAAG AATATATTAA ACAGGATATC
AAGGAATTCG TATCTCCTCA GCGCTTGATA GTCGAACTCC TGCCAGAATT CCTCATAATA
CTGGATGAAA TGATCGACGA TTTGGAGGCA GCGATTAAAA GTCGTAATAT AGATAAGATT
CAGGCCATAA GCCATGATAT CAAGGGTACG GCTGGTATGT ATGGATTTAT GAAGTTCTCC
AAACTGGCAA CAGCCATTGA ACAGGCCTCC CGAATAAAAG ATCTGACAAA AGTAAAGCAG
ATATTCTCTG AGCTTTACCA GGAGCTTGAA AAAGTTAAGA TACAGGTATC CTAG
|
|---|
| Protein sequence | MSGRIWWAES SIVQGNGNPA DMAKSQFLAN MSHEIRTPII GILGSLDLLD QSDLSQQQAT
NISIIRECGE QLLQIVDNIL DVSKIESDPV TPNLEPCNLG ELIIATVNRV DTLLKRKGLD
FKLNIDSRIP AKIMLDKTKL QQVLLNLLYN SIKFTPQGRV ELKAKIQPGD SYRLLFTISD
TGIGIPSSFV ERVFEPFTQA DNSNSRQYGG AGLGLYICKK LLELMEGEIS LSSMPGVGTT
VSFSIPLIEM DKVEIEVPYE LNREQFENKE EALLDFTPIR VLLVEDNPLN QKIVGQMLYN
YGFEVIMASN GLEALRILQD KPVNIVLMDM QMPVMDGYEA TQFIRQHSKW RDIPIIAITA
HSLPGDREKC LACGCTSYIA KPFKAHELVQ LMKEYIKQDI KEFVSPQRLI VELLPEFLII
LDEMIDDLEA AIKSRNIDKI QAISHDIKGT AGMYGFMKFS KLATAIEQAS RIKDLTKVKQ
IFSELYQELE KVKIQVS
|
|---|
| |