| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0375 |
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| Symbol | aksA |
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| ID | 4281209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 448399 |
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| End bp | 449571 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638137264 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_753085 |
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| Protein GI | 114565931 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCGTT CAAGCATGAA TAAAGATTGG TTCCTGGAGG AAGGCGCCCG GGTTAATATT
GTGGATACCA CCCTGCGGGA TGGAGAACAG ACAGCTGGTG TGGTCTTTAC TAACAATGAA
AAAATCCAGA TTGCCCGGTA CCTGGATATG ATTGGAGTAG ACCAGATAGA AGCCGGCATA
CCGGTTATGG GCGGGTTTGA AAAAGACTGC ATCAAAGAGA TAGTTGCTCT GGGTTTAAAA
TCCAGCATAA TGGCCTGGAA CCGGGCCGTA ATCGCCGATA TCAAAGAGTC CCTGGACTGC
GGGGTGGATG CTGTGGCTAT ATCCATATCT ACCTCGGATA TTCATATCGA GCACAAGCTG
CAAACCACGC GCCAGGATGT ATTGAACCGG ATGGCCGACG CCGTCAAATT TGCCAAGGAT
AAAGGGCTTT ATATATCCGT AAATGCTGAG GATGCATCTC GTTCCGATAT TGATTTCCTG
ACCGAGTTTG CCTTGCTGGC CAAACGATCA GGTGCTGACC GCCTGCGTTT TTGTGACACC
GTAGGGACCT TGACCCCCCT GTCCGCTTTT CGCTATATCA AAACCTTGAT TGACGCCGTA
GGTATCAACA TAGAGATGCA TACGCATAAT GATTTTGGGA TGGCTACCGC CAACGCCCTG
GCCGGGGTTT ATGCCGGTGC CAATTATGTC GGCGTTACTA TCAATGGGCT GGGAGAGAGA
GCGGGTAATG CTTGTTTGCA GGAAACTATC ATGGGGCTCA AATACCTGAT GAATGTGAAT
CTTACCTATA ACACCACCCT ATTCCGGGAA GTAGCCGAAT ATGTGGCCCA GGCTTCAGGC
CGGGCTTTAT CCGTCAGCAA ACCCATAGTA GGTTCCGGCA TCTTCGCCCA TGAATCTGGT
ATTCACGGTG ACGGGGTATT GAAAAACCCG CTTACTTATG AAGTATTCAG CCCTGAAGAA
GTCGGGCTGG AAAGACAGAT TGTAATTGGC AAGCATTCAG GTACAGCTGC CGTCCGCTCA
AAATTTACCC GTGAATACAA TATTGAGCTC AACGATACAG AGGCAGCCCA AATTCTGGCC
CGGGTTCGGG AAATGTCCAT TGAATTGAAA CGCTCCCTTT TTGACAAAGA GTTGATGTAT
ATATATGAAG AACTGTACGG GAAAGCCAGA TAG
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| Protein sequence | MTRSSMNKDW FLEEGARVNI VDTTLRDGEQ TAGVVFTNNE KIQIARYLDM IGVDQIEAGI
PVMGGFEKDC IKEIVALGLK SSIMAWNRAV IADIKESLDC GVDAVAISIS TSDIHIEHKL
QTTRQDVLNR MADAVKFAKD KGLYISVNAE DASRSDIDFL TEFALLAKRS GADRLRFCDT
VGTLTPLSAF RYIKTLIDAV GINIEMHTHN DFGMATANAL AGVYAGANYV GVTINGLGER
AGNACLQETI MGLKYLMNVN LTYNTTLFRE VAEYVAQASG RALSVSKPIV GSGIFAHESG
IHGDGVLKNP LTYEVFSPEE VGLERQIVIG KHSGTAAVRS KFTREYNIEL NDTEAAQILA
RVREMSIELK RSLFDKELMY IYEELYGKAR
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