Gene Swol_0369 details

Gene Information

• Locus tag: Swol_0369
• ID: 4281203
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophomonas wolfei subsp. wolfei str. Goettingen
• Kingdom: Bacteria
• Replicon accession: NC_008346
• Strand: +
• Start bp: 441936
• End bp: 443921
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 638137259
• Product: DNA ligase (NAD(+))
• Protein accession: YP_753080
• Protein GI: 114565926
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II)
• TIGRFAM ID: [TIGR00575] DNA ligase, NAD-dependent

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGGTCA GTTCCCGGAT AAAGGAGCTC AGGGAAGAGA TGCAAAAGCA TGATTACCAC 
TATTACATTT TAGATGCCCC GCTAATAAGT GACTCCGGCT ATGATCGCCT GATGCAGGAA 
CTGAAAAAGC TGGAGGAGGA ATACCCGCAG TATATAACCG CCGATTCACC TACGCAGCGG 
GTAGCGGGCA AGGCTTCGGA AAAGTTCTCC CCGGTAAGGC ACCGCTTTCC CCTCTTAAGC 
CTGGACAATG CCTTTTCCTA TCAGGATTTA TTGGAGTTTG ACCGCCGGAT AGGTCGGGTC 
GCCCGGACGC TGTCATATAT GGCAGAACTT AAAATAGATG GGGTTTCTAT CGCATTGGTT 
TATGAAAACG GGGTTTTGCT GAATGCTGCT ACCAGAGGGG ATGGTCTGGT GGGAGAGGAT 
GTAACAGCCA ACATCAGGAC AATAAAGACT ATCCCGCTTC GCTTGCGCCA TTCCCTGCCC 
CGGCTGGAAG TGCGCGGCGA AGTGTTTATG CCCAAACAGG AATTTATTCG ACTCAATGAG 
GAAAAAGAAG AAAAAGGGGA AAGGGTTTTT GCCAATCCCC GCAATGCCGC TGCTGGTTCA 
TTGCGGCAGC TCGATCCCCG GGTAACTGCC GGACGGGCTC TGTCTGCTTT CGTTTATGAC 
ATTATTTATA TGGAAGGACA AACTCTAGCG GAACAGCAAG AGGCCTGGCA TTTTATGCAG 
GAACTGGGCT TGCCGGTCAA TCCGGAGGTA CGCTTCTGCG CGGATATAAA TGCTGTTCTG 
GCTTTTACTG AGGAATATGC TGAAAAGCGA CATGAGCTTC CCTATGAGAT TGACGGGGTG 
GTGGTCAAGC TCAATACCCT GGCAGAACGG GAGGAGTTGG GGGCAACCGC TAGGAGTCCC 
CGTTGGGCGA TGGCCTACAA ATTCCCCGCC GAAGAAAAGG AAACCCGGCT CCTGGGCGTA 
GAAATAAATG TGGGGCGAAC CGGAATCATA GCTCCCACTG CTTTGCTGGA ACCGGTATTT 
TTGGCTGGAA CTACAGTTAG CCGGGCCAGT ATGCACAACT TTGATCTGAT CAAGGAAAAG 
GATCTGCGCA TCGGCGATAT GGTTTTACTG CATAAGGCGG GAGATATAAT TCCCGAAATC 
ATCGCTTCCC TCCCCGAAAA AAGAAGCGGG GAGGAGCGGG TGATAACGCC TCCGGAAAAC 
TGTCCCGCTT GTGATAGCAA GGTGGCGCGT TTTGCCGGAG AAGTGGCTTA TCGTTGCGAA 
AACATCAATT GCCCGGCCCG GCTCAAGGAA AGCCTTATCT TTTTTGCCTC CCGCGGGGCC 
ATGGATATAG ATGGATTAGG TTCAGCTGTA ATCGAACAGT TGGTAAACAA AGATATGGTA 
AAACGAATTG ACGACTTGTA TCGCTTACGG GAAGAGGAGA TCACTGCTTT GGAAAGAATG 
GGGCCAAAAT CCGCCGCCAA TTTAATCAAA GCCATTAATG AGAGCAAATC CCGTCCCCTC 
TCCCGCCTGC TTACCGCCCT GGGAATAAGG CATATAGGAG CCAGGAGCGC TAAAATTCTG 
AGCCGCCATA TTCATGATAT AGATGATTTT TATAAGTTAG GGGTAGAGAA TCTAACCAGC 
ATTCCGGAAA TCGGACCCAA GATGGCCGAG TCTATGGTTA ATTTCTTTGC TGAGCCCCGG 
AACCGGGAGA CCATAGAAGA TCTGAAAGAC CTGGGGGTTA ATACCCGGGA GGAGGCCATC 
GAGGCCGGAG AGCAACTGCT GCAGGGGAAG ACCTTTGTGC TTACCGGCAC CCTGCCCAGC 
CTGACCCGCC AGCAGGCCAG CGAGATGATT GAAAGCCGGG GAGGAAAAGT GAGCAGTAGT 
GTCAGTAAGA AAACCTCCTA TGTCGTGGCT GGCGATGATC CGGGCAGCAA GCTGGACAAA 
GCACTGCAAC TGGAATTGAC CATACTGGAC GAAGCAGGTT TTTTAAACCT CTTGGGATTA 
TCTTAG 

 

Protein sequence

MEVSSRIKEL REEMQKHDYH YYILDAPLIS DSGYDRLMQE LKKLEEEYPQ YITADSPTQR 
VAGKASEKFS PVRHRFPLLS LDNAFSYQDL LEFDRRIGRV ARTLSYMAEL KIDGVSIALV 
YENGVLLNAA TRGDGLVGED VTANIRTIKT IPLRLRHSLP RLEVRGEVFM PKQEFIRLNE 
EKEEKGERVF ANPRNAAAGS LRQLDPRVTA GRALSAFVYD IIYMEGQTLA EQQEAWHFMQ 
ELGLPVNPEV RFCADINAVL AFTEEYAEKR HELPYEIDGV VVKLNTLAER EELGATARSP 
RWAMAYKFPA EEKETRLLGV EINVGRTGII APTALLEPVF LAGTTVSRAS MHNFDLIKEK 
DLRIGDMVLL HKAGDIIPEI IASLPEKRSG EERVITPPEN CPACDSKVAR FAGEVAYRCE 
NINCPARLKE SLIFFASRGA MDIDGLGSAV IEQLVNKDMV KRIDDLYRLR EEEITALERM 
GPKSAANLIK AINESKSRPL SRLLTALGIR HIGARSAKIL SRHIHDIDDF YKLGVENLTS 
IPEIGPKMAE SMVNFFAEPR NRETIEDLKD LGVNTREEAI EAGEQLLQGK TFVLTGTLPS 
LTRQQASEMI ESRGGKVSSS VSKKTSYVVA GDDPGSKLDK ALQLELTILD EAGFLNLLGL 
S