| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0336 |
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| Symbol | |
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| ID | 4281550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 399952 |
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| End bp | 400911 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638137222 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_753048 |
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| Protein GI | 114565894 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.208046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTAAAT TGGCCTATTT AGCTCTGGAC AAGGTGAACC AGGGAATAAT AATACTGGAT
AAAGACCTGA AAATAGTTTT TTGGAATGCC TGGTTGGAGC AATATACGGG AAAAAGTCAG
GAAGAAACTA TTGGTCAGAA GCTGCCTCAG CTCTTTCCCA ACTTATCCCG TAAGCCTTGT
CTCGATGCCT TTCAGGGGGC TCTTTTTCAC CGGCAAAGCC GGTTTCTCTC CGGCGCTTTG
CACCACTGCT TTATTGCTCC GGTGGAGGAT ATACGAAAGG ATGTGCGCCA GAATCTACTG
GTAGAACCAC TGGACTATGA TGATGAAAAA TATATGCTGC TGCAGATTTC CGACCTGACC
GGTCATTACA GCCGGGTTAA GCAGCTTAAA CATATGATAA AGGAAATAGA CAGCGAATAC
GAACAGGTAC GGGCAGCAGA AAAGATAAAC CGCTTTAAGG CCTTTCATGA TGCTCTTACG
GGACTGCCTA ATCGCTATTT ATTCTATGAC CGCCTGGATA ATGCCATCAG CATGGCGCAG
CGTAATAAAG AGATGCTGGC GGTAGTTTTT CTTGATTTGG ATGGATTTAA GGAGGTCAAT
GACAACTATG GACACGAAGC GGGTGACCAC TTGTTGCAGG TGGTAGCGGA AAGGCTGAGG
GAATTGTTGC GGGAAAGCGA TACCCTGGCC CGTTTGGGTG GTGATGAGTT TCTGTTCATA
TTTCCCCAGA TAAAAAGCGA AGCAGATGCT GCAACTATTG CTAAAAAAAT ACTAACGGCT
CTGGCTAATC CTTTTATGTT CTGGGGACGG GAAGTATATC TGACGGCAAG TATTGGTATC
AGCCTTTACC CCAAAGATGC CAAGAATAGC CGCAATCTCA TCAACAAAGC GGATTTAGCC
ATGTACCAGG TAAAGAACAG TGGAAAAAAT GATTATCACT TCTATAATTC CGGTATATAA
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| Protein sequence | MFKLAYLALD KVNQGIIILD KDLKIVFWNA WLEQYTGKSQ EETIGQKLPQ LFPNLSRKPC
LDAFQGALFH RQSRFLSGAL HHCFIAPVED IRKDVRQNLL VEPLDYDDEK YMLLQISDLT
GHYSRVKQLK HMIKEIDSEY EQVRAAEKIN RFKAFHDALT GLPNRYLFYD RLDNAISMAQ
RNKEMLAVVF LDLDGFKEVN DNYGHEAGDH LLQVVAERLR ELLRESDTLA RLGGDEFLFI
FPQIKSEADA ATIAKKILTA LANPFMFWGR EVYLTASIGI SLYPKDAKNS RNLINKADLA
MYQVKNSGKN DYHFYNSGI
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