| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0329 |
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| Symbol | |
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| ID | 4281543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 394274 |
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| End bp | 395587 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638137215 |
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| Product | TRAP dicarboxylate transporter-DctM subunit |
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| Protein accession | YP_753041 |
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| Protein GI | 114565887 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000362936 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAT TTAGTCTTGG AGTGCTGGGG ATAATTGTTT TTTTGGTCCT GCTCATGCTG
CGCATGCCCA TAGCTTACGC TATGGCCCTG GTGGGTTTTA CTGGCTTCGC CCTGCTCTCT
TCAGCTTCAG CGTCATTCAG CATGGTAGCC AAGGAAATAT TCAATACTTT TTCCTCTTAT
TCGCTGAGCG TTATTGCTAT GTTCGTTTGG ATGGGTTTCC TGGCCTTTTA TTCCGGAATC
GGCACCCGTC TTTATGTCTT TGCCTATAAA CTAATGGGGC ATCTTCCCGG CGGGTTGGCT
GTAGCCACTC AGCTGGCCTG TGGTATATTT GGAGCCATTT GCGGTTCCAA TACAGCCACT
GCAGCTACTA TGGGGGCCAT TGCCCTGCCC GAGATGGAAA AGTACCAGTA CGATACTTCG
CTGGCCACGG CCAGTATTGC CGCCGGCGGG GTTCTGGGAG TTTTGATTCC CCCCAGTGTT
ATATTTATTG TTTATGGCAT GGCTACGGAG CAATCCATAG GAGAACTCTT TATGGCCGGT
ATCATACCTG GAATCCTGCT TATGCTGGCC TATATAGCGA CTATTTTATT TCTCACTCTG
CGTAACCCCG CCCTGGGACC AGCAGGCCCC AAAGCGAGCT GGAAAGAGAG AGCTTCTTCC
CTGCGGGGGG GATTATTCGA AGTACTGGTA GTCTTTGCCC TCTCCATCGG CGGCCTTTTT
GCCGGCTGGT TTACCCCCAC CGAAGCCGGA GCCGTAGGAG CCGCCGGAGT GCTGGCGGTA
TCCTTGCTGG GGAAGCATCT GGACTGGACC GGGTTTAAAA AATCCCTTTA TGATACTACC
CGAACCACCG CCATGATAAT GCTGATGATT GCCGGCGCCA TGATTTTTGG CCGTTTTATG
GCCATTAGCC GGATTCCTTT TGAGCTGGCC AGCTGGGCTG GTAGCTTGCC CCTGCCCCCG
TTTGCCATCG TAGGGGTCAT TCTGCTTATT TATCTGGTAC TGGGTTGCTT TATTGACGCC
CTGGCCTTAA TTTTGCTGAC CATTCCCATT TTCTACCCAG TGGTGGTAAA AACCCTGGGC
TATGATCCTA TCTGGTTCGG AGTAATAGTG GTTATGGTAG TAGCCATGGG GGTTATCACC
CCTCCGGTGG GGATGAATGT CTACATAATA AAAGGAGTAG CTCCTGATGT TCCCCTGGAA
GTTATATTCC GGGGAATATG GCCTTTTCTT CTGGCCATAA TATTTTCTCT GATTATACTG
ATAGCCTTTC CCTCCATCGC TACCTTTTTG CCACATCTCT TACATGGAGT TTAA
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| Protein sequence | MNPFSLGVLG IIVFLVLLML RMPIAYAMAL VGFTGFALLS SASASFSMVA KEIFNTFSSY
SLSVIAMFVW MGFLAFYSGI GTRLYVFAYK LMGHLPGGLA VATQLACGIF GAICGSNTAT
AATMGAIALP EMEKYQYDTS LATASIAAGG VLGVLIPPSV IFIVYGMATE QSIGELFMAG
IIPGILLMLA YIATILFLTL RNPALGPAGP KASWKERASS LRGGLFEVLV VFALSIGGLF
AGWFTPTEAG AVGAAGVLAV SLLGKHLDWT GFKKSLYDTT RTTAMIMLMI AGAMIFGRFM
AISRIPFELA SWAGSLPLPP FAIVGVILLI YLVLGCFIDA LALILLTIPI FYPVVVKTLG
YDPIWFGVIV VMVVAMGVIT PPVGMNVYII KGVAPDVPLE VIFRGIWPFL LAIIFSLIIL
IAFPSIATFL PHLLHGV
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