| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0327 |
|---|
| Symbol | |
|---|
| ID | 4281541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 393413 |
|---|
| End bp | 393874 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638137214 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_753040 |
|---|
| Protein GI | 114565886 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000150784 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATC AACAGCACTT TATGCGATTG GAACGCATGT ATTTGAGTGC CCCCTACAAC
CAGCAGCTTT ATCATAATAA TACCATCAAG GTTACCCGGG AGCAGGCTAT TATAACTACG
GAGGTAATGG AGAAACACTT TCATGGAGCC GGGGCCATGC ATGGCTCAGT CTATTTCAAG
CTGCTGGATG ATGCCGCCTT TTTTGCGGTA AATTCAATTA TTAAAGACTA TATGGTATAC
ACGGTATCAT TTAATGTAAA TCTTTTGCGT CCGGTTGGCA CCGGGATAAT CAAGTCGGTA
GGAATGGTAA AGCACCAGGC CAGGAACCGC TTGGTGGCTG AGGCCAATCT CTATGATCAG
GAGGGAAAAC TGGCCGCCTG TGGTACGGGT AACTTTATGC GAAGCCCCTT AAAACTGGGG
GAAATGCCGG AATATACTCG CGAGTTAAGC GATGAAGGGT AG
|
|---|
| Protein sequence | MNDQQHFMRL ERMYLSAPYN QQLYHNNTIK VTREQAIITT EVMEKHFHGA GAMHGSVYFK
LLDDAAFFAV NSIIKDYMVY TVSFNVNLLR PVGTGIIKSV GMVKHQARNR LVAEANLYDQ
EGKLAACGTG NFMRSPLKLG EMPEYTRELS DEG
|
|---|
| |