Gene Swol_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0321 
Symbol 
ID4281622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp387777 
End bp388454 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content43% 
IMG OID638137208 
Producthypothetical protein 
Protein accessionYP_753034 
Protein GI114565880 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.911962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCTGG TAATCATCCG TACCTTAATA TTATTTACGG TTACTGTTAT ATTCCTGCGC 
TTGATGGGGA AAAGACAGAT TGGGCAATTA CAGCCTTTTG AGCTGGTGAT TATTATAATG 
ATTTCTGAAC TGGCCGCCAT CCCCATGGAA AATACCGGCA TCCCCCTGCT GAGCGGATTG 
ATCCCCATCT TTGTTCTCTT TACCGCCCAG GTTACCTTAT CTTATTTATC TTTGCGCAGT 
GAAAAGGCCC GGGGAATTAT CTGCGGCAAA CCCAGTATTT TGATTGAAAA CTCACAGATT 
GTGGAAGATG AGTTGAGAAG AATACGCTAC AACATCAACG ATTTGCTGGA ACAGCTGCGT 
TCCAAGAATG TAGCTGATAT AGCCGATGTA GAATATGCCA TTTTGGAAAC CAGCGGTCAG 
CTCAGTGTGA TTCTTAAATC TGAAAAAAGG CCAGTGAAAC CGGAAGATAT GGATTTGCCG 
GTAAAATACG ACGGCCTTCC CATAACCCTG GTGATAGACG GACAGGTCAT TAATGAAAAT 
ATTAAGAAAA TGAATTATAA CGAGGAATGG CTGCAGCAAA AGCTAAATGA GTCCGGAATA 
AATAATATAA AAGATCTACT CTTTGCCAGC CTTGACCCGG ATGGCACGAT CTACTTCCAG 
CTCAAGAAAG GGGTTTAA
 
Protein sequence
MVLVIIRTLI LFTVTVIFLR LMGKRQIGQL QPFELVIIIM ISELAAIPME NTGIPLLSGL 
IPIFVLFTAQ VTLSYLSLRS EKARGIICGK PSILIENSQI VEDELRRIRY NINDLLEQLR 
SKNVADIADV EYAILETSGQ LSVILKSEKR PVKPEDMDLP VKYDGLPITL VIDGQVINEN 
IKKMNYNEEW LQQKLNESGI NNIKDLLFAS LDPDGTIYFQ LKKGV