| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0313 |
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| Symbol | |
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| ID | 4281614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 377841 |
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| End bp | 379208 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638137201 |
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| Product | hypothetical protein |
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| Protein accession | YP_753027 |
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| Protein GI | 114565873 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00088835 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGTT CCGCGAGAAT GCGTAAGCAG CGTATAGGAA AATTACTGTG GGATTTTTCC
CTGCCGACTA TTGTTGGTAT GCTGGTCAGT TCACTATATA ATGTCATAGC CCGGATATTT
GTGGGCCGGG GTATAGGGTC CCTGGCGATA GCGGCCACTA CGGTAGCCTT TCCCATAATG
ATTTTGCTTA TGGCCGTCTC TCTCCTGATT GGGGTCGGTG CCACCTCTTT GATTTCCCTT
AAGCTGGGAG AGCAAAAGAA GGATGAAGCT GAGAAGGTAG CGGGAAATGC CATGACCATG
TTAATCATCT TGCCAGCGGC TTTGGCGGTT TTATTTTTAC TGTTTACGGA ACCAATACTG
ATTGCTTTTG GAGCCAGTGC CGCCGTACTT CCTTATGCCC GCGACTTCAC CCGGATCATT
ATGCTGGGCT CGGTATTCGG CTCTATCAGT ATGGGTATGA ATAACTTCAT CCGGGCGGAA
GGTAATCCGG CTATGGCGAT GTCCACCCAG ATACTGGGGG CAGTAGTGAG TGTAGCTTTA
AATTATGTTT TTATCTTCAT ATTCCACTGG GGGATAAAGG GAGCTGCTCT GGCCACTATA
CTAGCACAAT TAATTTCAGC CATCTGGGTA TTAAGCTATT TTTTCACCGG CAGGAGCCTG
GTGAAAATTC ACTGGAAAAA CCTGAAGCCT GCCTGGCCGG TATTGAGCGG TATTATGGCT
ATCGGTTTTG CCCCTTTTGC CATGCAAACA GCTGCCTGTA TCCAGCAGCT CATATTAAAC
CAGACCTTGA TGTTTTACGG TGGGGATCTG GCCCTGGCTG CCATCGGCAT TGTAATGAGC
ATATCCATGC TGCTGGTTAT GCCAGTACTG GGCCTCGGTC AGGGGGCACA ACCAATAATC
GGCTACAATT ACGGAGCTTG CCAATACCAA CGGGTAAAGG AAACCTGGAA AACCGCGGTT
TTAGCCGGTA CGGGTATAGC GGTAGCGGGA TATATGGCTC TTCATATCTG GCCACTGCAA
TTAGTAGGCT TGTTTAGCAA GGGAGATACC GCCCTTACCA CCATGACGGT TCATGCTATG
TTAACTTTCT TTGCCCTGCT GCCGGTAGTG GGGTTTCAGG TTGTGAGTTC CATGTATTTT
CAAGCCGTGG GCAAAGCCAG GCAGGCCGCA ATCCTCAGCC TGTCACGGCA GTTTTTGATT
TTTATTCCCT TGCTTCTGAT TCTACCGCGT TTTTGGGGTA TTGATGGGGT ATGGCGAACT
GCTCCTATTG CTGATGGCCT GTCCGTAGCT CTAACCGCCG GCTTTATTTA TTTTGAAATG
AAAAAAATGC GGCAGGAGGA AACCCGACAG CCCAGTGAGG ATAAGTAG
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| Protein sequence | MDRSARMRKQ RIGKLLWDFS LPTIVGMLVS SLYNVIARIF VGRGIGSLAI AATTVAFPIM
ILLMAVSLLI GVGATSLISL KLGEQKKDEA EKVAGNAMTM LIILPAALAV LFLLFTEPIL
IAFGASAAVL PYARDFTRII MLGSVFGSIS MGMNNFIRAE GNPAMAMSTQ ILGAVVSVAL
NYVFIFIFHW GIKGAALATI LAQLISAIWV LSYFFTGRSL VKIHWKNLKP AWPVLSGIMA
IGFAPFAMQT AACIQQLILN QTLMFYGGDL ALAAIGIVMS ISMLLVMPVL GLGQGAQPII
GYNYGACQYQ RVKETWKTAV LAGTGIAVAG YMALHIWPLQ LVGLFSKGDT ALTTMTVHAM
LTFFALLPVV GFQVVSSMYF QAVGKARQAA ILSLSRQFLI FIPLLLILPR FWGIDGVWRT
APIADGLSVA LTAGFIYFEM KKMRQEETRQ PSEDK
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