| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0280 |
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| Symbol | |
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| ID | 4283589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 322884 |
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| End bp | 325001 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638137173 |
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| Product | exoribonuclease II |
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| Protein accession | YP_752999 |
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| Protein GI | 114565845 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000108449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAATA GGGATAGCAT ACTCGATTGT ATGCACAAAG AAAGCTACAA GCCGTTGAGT
TACCATGAAC TAAAAGCGGT TTTTGGCATC AAAGATGTCG ATGAAGACAT TAAATTCAGC
AAGATCGTGG GGAAACTGGA GAAAGAGGGA GAGATCGTTA AAACCCGGGC CGGAAAATTT
GGCCTGCCGG AAATGATGAA CCTGGTCAAA GGGATAATCC ATATCAGCAA AAAGGGCTTT
GGCGTTTTAG TACCTGATAA AGCAGGCCTT GGAGAGGTAT TTGTCTACGG CAAGAAGCTC
AACGGGGCTA TGCATAATGA CCGGGTGATG GTAAGGATAC AGGAAAAGGG ATATAATGGT
CAGCGACCAG AGGGTACGGT CATCAGAATC CTGGCCCGCA ATACCCGGGA ACTGGTTGGG
ACCTTTACCA AAGGCCGCCA CCTGCTGCAG GTGGTTCCGG ATGATTCCCG GCAGATTTAC
CCTATCTATG TTAAAGCCTC GCGTAAATGG AAAGCCAAAG AAGGAGACAA GGTATTGGTC
AGGATCAGCT CCTGGCCTGA ACGGGACAAG GTGGCTGAGG GTAAAATCGT GGAAGTGTTG
GGACGCAAGG GAGAAGCGGG TGTTGATCTT AAAGTTTTGG CCAAAAAACA TGGTCTGCGC
CTGGAGTTTC CCGACAATGT GATGGAAGAA GCTCGTAATG TAGCCGTTGA GGTCAATGCG
GAAGAGATAT CCCGGCGCCG CGACTTGCGG GAATGGCGTA TGGTCACCAT TGATGGTGAA
GATGCCAAGG ATCTGGATGA TGCTGTTTCC ATTGAAAAAA CTTCGAAAGG CTACAAGCTG
GGGGTGCATA TTGCTGATGT CTCCCATTAT GTTAAAGAAG ACTGCAAGTT GGACCGGGAA
GCCTTTAAGC GCGGCACCAG TGTTTACCTG ATAGATAAAG TTCTGCCCAT GCTGCCGGTG
GAATTATCCA ATAATATTTG CAGCCTCAAT CCTCAGGTCG AGCGCCTGGC TATAAGCTGT
ATAATGGATA TTGATTCCTG GGGACAGGTA GTGGATTACG AGATCGTAAA GTCGGTAATC
CAGATAAATG AACGCATGAC TTACAGTGAT GTAAACCGTA TTCTGGCCGA TAATCCCCCG
GCTTTAAAGG AGCGCTACGG GGAACTGGTA GAGGATTTCT TCCTGATGAA AGAACTATCT
GATATCCTGC GCCGTTCCCG CTTAAATCGG GGGATGCTGG ATTTTGATTT CCCCGAAAGC
AAGGTGATAG TAGACGAAGA GGGTTTTCCC CTGGAAGTCA AAAGAGCCGA GCGCGGTCCG
GGTGAAATGC TGATAGAAGA TTTTATGATA AAAGCCAATG AAGTGGTAGC GGAACACCTG
CATAATCTGG GGCTTCCCGT CTTGTATCGG GTCCATGAAA AACCGGATGA AGAAGCTATA
AGCGAGTTAA ACAAGGTGTT GGCGGTATTT GGGCATAAGA TAAAAGGACA TAAAGTCAGC
CCCATGCTTT TTCAAGGGAT ACTGGCTGAC ATTAAAGGCC AGCCGGAGGA GCAAATGATT
TCCTTGATGA TTTTACGCTC CATGAAACAT GCTTCCTATC TGCCCGAGCC CCGGGGTCAT
TTTGGTCTGG CTTCCCCCTA CTACTGCCAT TTTACCAGTC CTATCCGGCG TTATCCCGAC
CTTATAGTTC ACCGGGTGCT CAGCAGCCTT TTGGATGGGG GTATGACTAC CCGTAAGAAG
AGCAGCCTGG AAAAGAAGAT GACTATTTAT GGAGAACAAT CCAGCCTGCA GGAGATGAAA
GCCGAGGAGG CGGAAAGAGA GCTCCTGGAT GTGAAAAAGG CCCAATATAT GTCCCAGTTT
GTAGGTGATG AATTCTCAGC TCGCATCTCT TCCGTGCAAG CCTTTGGTTT TTTTGTAGCC
CTGGAAAACA CCGTAGAGGG TCTGGTGCAT ATCTCCAGCA TAGCTGATGA TTACTACCTG
TTTAGTGATC GTACCTATAC TCTGCGTGGC CGGCATAGCG GGAGAAAATT TGCTATCGGC
GATCAAGTTC GGGTGCAACT GGTTAGAGTG GATGTGGATG AAGGCAAGAT CGATTTTGAA
TTGCTCCAGG ATGAGTAA
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| Protein sequence | MINRDSILDC MHKESYKPLS YHELKAVFGI KDVDEDIKFS KIVGKLEKEG EIVKTRAGKF
GLPEMMNLVK GIIHISKKGF GVLVPDKAGL GEVFVYGKKL NGAMHNDRVM VRIQEKGYNG
QRPEGTVIRI LARNTRELVG TFTKGRHLLQ VVPDDSRQIY PIYVKASRKW KAKEGDKVLV
RISSWPERDK VAEGKIVEVL GRKGEAGVDL KVLAKKHGLR LEFPDNVMEE ARNVAVEVNA
EEISRRRDLR EWRMVTIDGE DAKDLDDAVS IEKTSKGYKL GVHIADVSHY VKEDCKLDRE
AFKRGTSVYL IDKVLPMLPV ELSNNICSLN PQVERLAISC IMDIDSWGQV VDYEIVKSVI
QINERMTYSD VNRILADNPP ALKERYGELV EDFFLMKELS DILRRSRLNR GMLDFDFPES
KVIVDEEGFP LEVKRAERGP GEMLIEDFMI KANEVVAEHL HNLGLPVLYR VHEKPDEEAI
SELNKVLAVF GHKIKGHKVS PMLFQGILAD IKGQPEEQMI SLMILRSMKH ASYLPEPRGH
FGLASPYYCH FTSPIRRYPD LIVHRVLSSL LDGGMTTRKK SSLEKKMTIY GEQSSLQEMK
AEEAERELLD VKKAQYMSQF VGDEFSARIS SVQAFGFFVA LENTVEGLVH ISSIADDYYL
FSDRTYTLRG RHSGRKFAIG DQVRVQLVRV DVDEGKIDFE LLQDE
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