Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0274 |
Symbol | |
ID | 4283583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 316800 |
End bp | 317597 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638137167 |
Product | Triose-phosphate isomerase |
Protein accession | YP_752993 |
Protein GI | 114565839 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.340442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGAAAAA AGTTAAAGGG AGGGGATTTT CTGCGCCGGA GATTAATTGC CGCCAATTGG AAAATGAATA AAAGTATCCG GGAGGCCGAA GATTTTGCCC GGGAGTTTTT ACAACTGATC CCGGATGCCA ACAGTAACGA GCGACCGGAG ATCGTGATTT GTCCTCCATT TACGACTTTA AGTACATTAA AATCTATCAC GGAAGATTAC GGGGTTAAAC TGGGCGCCCA AAATGCCTTC TGGGAAGAAA AGGGAGCTTA TACCGGGGAG ATTTCCCCAT CCATGCTGTT GGACGCCGCT TGCAGTTATG TGATTCTGGG GCATTCCGAA CGACGGCAGA TAATGGGAGA AAGCAATAAT ATAATAAACC GTAAAGTCAA GGCAGCTGTG GAGGCAGGAA TTATTCCCCT GCTCTGTGTG GGGGAAACCC TGCAGGAGAG GGAAAAAGAT AGGGCCCGGG AAGTAGTGAA GGAGCAGCTG GTCAAATGCC TGAAGGATAT CAAGCTCTCC GGGGAGAAAC TGGTGGTAGC TTATGAACCG GTTTGGGCTA TTGGTACCGG AGTTAACGCC AGCAGTGACG ATGCCCAGGA GATGATTGCT TTTATCCGTA GCTGTCTGGA GAAAATCTAT AGCCGGGAAG AAGCTGATTT AACCAGAATC ATATATGGAG GCAGCGTTAA AGAGGAAAAT ATTGCCGAAT TTTTGGGAGA AGCGGATGTG GATGGGGCTC TGATCGGCGG GGCCAGCCTG CAAGCTGAAT CTTTGGCCCG AATAGTGAGG TTGAGCAGCA ATGCCTAA
|
Protein sequence | MGKKLKGGDF LRRRLIAANW KMNKSIREAE DFAREFLQLI PDANSNERPE IVICPPFTTL STLKSITEDY GVKLGAQNAF WEEKGAYTGE ISPSMLLDAA CSYVILGHSE RRQIMGESNN IINRKVKAAV EAGIIPLLCV GETLQEREKD RAREVVKEQL VKCLKDIKLS GEKLVVAYEP VWAIGTGVNA SSDDAQEMIA FIRSCLEKIY SREEADLTRI IYGGSVKEEN IAEFLGEADV DGALIGGASL QAESLARIVR LSSNA
|
| |