Gene Swol_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0260 
Symbol 
ID4281274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp302802 
End bp303824 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content49% 
IMG OID638137154 
Productbifunctional phosphoglucose/phosphomannose isomerase 
Protein accessionYP_752980 
Protein GI114565826 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID[TIGR02128] bifunctional phosphoglucose/phosphomannose isomerase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTTG AGAAAATGAG GGACTACCTG TATCATCTTC CAGAGCAGTT TGCTGAAAGC 
CTCAAGATGG AATTTGACTT TGTCGAGGAT TACCGCTCAG CTTATGAAAA TATTGTAGTT 
TCCGGTTTGG GGGGATCAGC CATTGGCGGG GATATATTGC GCACTTTTGC ACTACAAAAA 
GCCAGTATAC CGGTAGTGGT AAACCGCGAT TATAATCTTC CCGCCTTTGT GGGGGAGAAG 
ACCCTTTTCT ATGCGGTCAG CTATTCCGGG AATACTGAAG AGACCTTGAG TGCTTACCGG 
CAAGCGCGGG AACGGGGGGC AGCCATAGTC TGCTTTAGCA GCGGGGGAGA ACTGGAGAAG 
ATGGCCCGGC TGGATGGCAA GCCAGTGGTA AAAGTACCGA CCGGTTTGGT ACCACGGGCA 
GCTACCGGCT ACCTCTTTGC TCCATTGGTC TTGTTGCTGG AAAAACTGGG GATAGTAGCC 
GGTGCAAGGG ACGAATTGGG GGAATGTGTC CTGGTTTTAC GGGATATCCG CGATTCGCTT 
CATCCGGAAA TAGAGATAGA AAAAAACCCG GCCAAAAAAA TAGCCCGGGA GCTCAAGGAT 
AGTATCCCAA TAATCTGGGG CAGCAGCGGA ATTTCCGAGG TGGCGGCCCT GCGCTGGAAA 
GCTCAGATTA ACGAGAATGC CAAGAGTCCG GCTTATTACC ATGTTTTTCC GGAGCTCAAC 
CACAACGAGA TTGTCGGATT TGAAGTTCCT GCCGAACTTG TATCGCGGCT CTTTGTGGTT 
ATATTAAAAG ACCGTTTTGA CCATGAGCGG GTAAAACGAC GCATGGCAAT AAGTCGGGAT 
ATAATCAAGC AGCGGGTTAA GGGTTTTGTT GAGGTAGAAA GCCGGGGTGA ATCATTCCTG 
GCCCGGCTCT ATTCGCTCTG TTATACCGGA GACTATGCCA GTTTTTATTT GGCTTTGGAA 
AACGGGATAA ACCCGACTCC GGTGGCATTA ATCGATTATT TGAAGGCGGA ATTGGCTAAA 
TGA
 
Protein sequence
MTVEKMRDYL YHLPEQFAES LKMEFDFVED YRSAYENIVV SGLGGSAIGG DILRTFALQK 
ASIPVVVNRD YNLPAFVGEK TLFYAVSYSG NTEETLSAYR QARERGAAIV CFSSGGELEK 
MARLDGKPVV KVPTGLVPRA ATGYLFAPLV LLLEKLGIVA GARDELGECV LVLRDIRDSL 
HPEIEIEKNP AKKIARELKD SIPIIWGSSG ISEVAALRWK AQINENAKSP AYYHVFPELN 
HNEIVGFEVP AELVSRLFVV ILKDRFDHER VKRRMAISRD IIKQRVKGFV EVESRGESFL 
ARLYSLCYTG DYASFYLALE NGINPTPVAL IDYLKAELAK