| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0259 |
|---|
| Symbol | |
|---|
| ID | 4281273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 301619 |
|---|
| End bp | 302629 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 638137153 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_752979 |
|---|
| Protein GI | 114565825 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTTGTAT GTGTGGATCT GGGAGGCAGC AAAGTGCTGA TGGCTGTTGC TATGGCTGAG
GGACAGTTCT TGCGCCGCCT GAAGTTTCCC ACCCAGAGCG AAAAAGGGCC GGAAGATATT
CTGGATCGTA TAGCAGCCGG GGTTCAGGAA ATGTTAAAAG CAGGGGCGGA AACAGCTGAT
AGGATTGTGG GTATAGGAGT AGCTACTCCT GGGCCGCTTT CGTTTCCGGA CACGGTGGTT
TGGGATTCGC CCAACCTGGG ATGGAACCGG GTGAACATTA AAGAGGAAAT GAAAGCTCGG
CTGGGTTGGG AGCCGCTGGT GGAGAAAGAT ACCAATATGG CTGTTTTGGG AGAATATTAT
TTTGGCCAGA TGCAGCGCTG CCAGAACCTG CTCTATATTA CGGTTAGTAC CGGAATCGGT
GGAGGAATAA TGTTAGGAGG CCAGCTCTAT AGGGGTCAAA ATGGGGGAGC CGGAGAAATC
GGGCATATGG TAGTGGCTTC CGGGGGGAGA ATCTGCGGCT GCGGAAGGCA GGGCTGCTTG
GAAGCTCAGG CTTCAGGAAC CGCCATAGCG CAGATGGCAA AGGAGCTTGG GCAGGAGGGA
AAAGGACAGG GAATGTTTTC CGGCCTGGGC ACGGTCGGGG CCAAAGAGGT GGGAGAAGCC
GCTCGCCGAG GAGATAGGGA AGCCCGGACC ATTGTAGCTC AGGTGGTAGA TTATCTGGGA
ATAGCCCTGG GCAACCTGGT TAATATATTT AATCCCGAGA AAATAGTATT AGGCGGGGCC
GTAAGCCTGG GTTGGGAAGA CCTTCTTCTG GAGCCGCTTC GGGAAAGAGT TAAAGCGGAA
GTTTTCCCGC TTAATGCCCG CGATCTGCAG ATAGAGGTTA CCCGCCTGGG GGAGGATGTA
GTACTTTATG GTTGCATAGC AGAAGTCGGA AGGCGGAAGA CGGAAGGCGG AAAACGGAAG
GCGGAGGACG GAAGGAGTTG TATAAGGGTC GACTCCACCA ACTTCTTTTG A
|
|---|
| Protein sequence | MVVCVDLGGS KVLMAVAMAE GQFLRRLKFP TQSEKGPEDI LDRIAAGVQE MLKAGAETAD
RIVGIGVATP GPLSFPDTVV WDSPNLGWNR VNIKEEMKAR LGWEPLVEKD TNMAVLGEYY
FGQMQRCQNL LYITVSTGIG GGIMLGGQLY RGQNGGAGEI GHMVVASGGR ICGCGRQGCL
EAQASGTAIA QMAKELGQEG KGQGMFSGLG TVGAKEVGEA ARRGDREART IVAQVVDYLG
IALGNLVNIF NPEKIVLGGA VSLGWEDLLL EPLRERVKAE VFPLNARDLQ IEVTRLGEDV
VLYGCIAEVG RRKTEGGKRK AEDGRSCIRV DSTNFF
|
|---|
| |