Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0248 |
Symbol | |
ID | 4281427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 286870 |
End bp | 288039 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638137144 |
Product | C-terminal processing peptidase |
Protein accession | YP_752970 |
Protein GI | 114565816 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000014936 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGAAAGA GCCGATTGGT AAATAGTTTT AAAACTTTTT TTGCGCTGGT GGGAATGCTG GTTGTGGCTG GCCTTTTGTA TGTTTACATT ACCAATGCCG CCGGTATAAG CACTCTTATT AGCGTATTGG GGCTGGTGAA GAGCCAGGCT CTCTATGAAG TTAATAATAG CCAGCTTATT CAAGGGGCAA CGGCGGGGAT AGTTGATTCC ATGCAAGACC CTTATTCCAA ATACCTGGAT AAGCAAACCT GGAAGGACCT CAGAGAGAGA TTGGAAGCGG AATTTGGGGG AATTGGGGTT TATGTTCTGC AGGATAATGA AGGTCGCCTG AAAATAGTAT CACCCATAAA GGATACTCCA GCTTATAGGG AGGGGGTAAA ACATGGGGAT ATTATTTTGC GCATCAACAA CAAGAGCGCG TTGAATATGA GTACTGATGA TGCCGTACAC CTGATGCGGG GTGATCCCGG GACCCAATTG CTCCTGGGAG TATACCGGGA ATCAGATAAG AAAGAATACG ATTTTCGCAT AATCCGGGAG ATAATCAATG TCCCTTCGGT GGAAGACAAG ATAATTAGTG AAAAGCCTCG TATCGGTTAT ATTGGACTCA ACCAGTTCCA CTCTCGTTCC GCTGAGGAAA TGAAAGAGAG TATAGATGAG CTGCTGGAGG AGAAAAAAGT CGAGGGCCTG ATCTTAGACC TGCGTAACAA TGGGGGAGGC GATTTTGATG CGTCCATTGC CATCGCCTCA ATTTTTCTGG ATGGGCAGGA AGTTGTAAGT GTAGTAGACC GCAAAGGCAA CAAAACCGTA CACAAGGCCG GTCATGGCAA GTTGGATATT CCACTGGTGG TAATGGTAAA CGGTGATAGC GCCAGTGCTT CGGAAATCCT GGCTGGAGCC TTGCAGGATA ATAAACGGGC CTTGCTGGTA GGGGACAAAA CTTATGGTAA AGGCCTGGTA CAGACGGTTT ATCCTCTGGG CAACGGGGGA GCCTTGAAGC TTACTACTCA GAAGTACTTT ACCCCAGATG GTACTGATAT AAACGAAATC GGGATAACCC CGGACTTCCC AGTTAAAAAT GAAGCTAACA GTGAAGAGGA TCGGCAGTTG CAAAAGGCTC TGGAGATAGT GAAAAAGCAG ATAGCCGGGC CGGTGAGCAA GGCTTCTTGA
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Protein sequence | MRKSRLVNSF KTFFALVGML VVAGLLYVYI TNAAGISTLI SVLGLVKSQA LYEVNNSQLI QGATAGIVDS MQDPYSKYLD KQTWKDLRER LEAEFGGIGV YVLQDNEGRL KIVSPIKDTP AYREGVKHGD IILRINNKSA LNMSTDDAVH LMRGDPGTQL LLGVYRESDK KEYDFRIIRE IINVPSVEDK IISEKPRIGY IGLNQFHSRS AEEMKESIDE LLEEKKVEGL ILDLRNNGGG DFDASIAIAS IFLDGQEVVS VVDRKGNKTV HKAGHGKLDI PLVVMVNGDS ASASEILAGA LQDNKRALLV GDKTYGKGLV QTVYPLGNGG ALKLTTQKYF TPDGTDINEI GITPDFPVKN EANSEEDRQL QKALEIVKKQ IAGPVSKAS
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